PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021659142.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | Whirly | ||||||||
Protein Properties | Length: 159aa MW: 17581.2 Da PI: 10.3682 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 162.8 | 9.6e-51 | 45 | 153 | 2 | 110 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkv 96 v+k+kaal+v++v ptf++l+sgn++++r+G ++l++++a++erkyd+ek+q+falsatev++l++l++k+s+effhdp++ +sn+G+vrk+l++ XP_021659142.1 45 VFKGKAALSVEPVPPTFTKLNSGNVRVERRGIMMLTFMPAIGERKYDYEKRQHFALSATEVGSLISLGPKDSSEFFHDPSMLSSNAGQVRKSLSI 139 9********************************************************************************************** PP Whirly 97 ePlpdGsGlfvnls 110 +P +dG G+fv+ls XP_021659142.1 140 KPQADGGGYFVSLS 153 ************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MMKLSRLLQQ SRDASRLHAL TFQAGISTAR QDLTANERIY APYCVFKGKA ALSVEPVPPT 60 FTKLNSGNVR VERRGIMMLT FMPAIGERKY DYEKRQHFAL SATEVGSLIS LGPKDSSEFF 120 HDPSMLSSNA GQVRKSLSIK PQADGGGYFV SLSKLSFLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 1e-66 | Whirly family protein |