PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659001.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 1713aa MW: 186631 Da PI: 6.2093

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.2e-09	789	830	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W+ eE e ++d + +G++ +++Ia+ + ++t +c+++++k XP_021659001.1 789 PWSSEERETFIDKLATYGKD-FRKIASFLD-HKTTADCVEFYYK 830 8***************99.*****.*********98 PP
2	Myb_DNA-binding	32.6	1.8e-10	1003	1043	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT eE ++++av +G++ ++ I+r++ +R++ qck ++ k XP_021659001.1 1003 WTDEEKSIFIRAVSSYGKD-FAMISRCVR-TRSRDQCKAFFSK 1043 ***************99.*****.******99866 PP

Sequence ? help Back to Top
Protein Sequence Length: 1713 aa Download sequence
MPPERLPGDR KDFFKERKPR WRESASGHYG SSRDISRWGG SNEFRRPPGY VKLGAWHPFA 60 EESGHGYAPF RSSDRILEEK NFRPSVSRGD SKYGRNGRDN RGSFSQRDWR THSWELNNGS 120 PNAPGRLHDA STVQRSLDDT VSYPSSHHHS EFMNTWEQLH SKDHHDNGKM VVVNGMGTGQ 180 RGDRENSLDW KPLNKWTRSG SLSSRGSGFS HSSSSKSLGG ADSCEGKAEL QLKNASLVQS 240 PSGDAAACVT SAPSEEMAAR KKPRLNWGEG LAKYEKKKVE GPEVNLSKDG VVVSSSNIEP 300 IQSQSSNLVE KSPQVMGLSD CASPTTPSSV ACSSPGVEEK TSGKGISPDN LCGSPSIGSQ 360 SHIEGLSFNL EVLDATSVAN LGALLVELLQ SDDSSSVDSS FIRSTAMNKL LVLKGGTSKA 420 LEVTESEIDL LENELKSLKF ESGSRFPCLA ASSSFPLVDE VKLCSEQGAA ASIPRPSPLQ 480 VSFCGAGDVE KIPICNGVLE VVHGGSKDDD VDSPGTATSK FVESVSMVKA VSSFDLVKQD 540 AHSADGGVIQ TATLLKSVLP CTSEQVNAPT CMDVNLLTES KEGASFPSDA SCAEDNLCNL 600 ILAANKESAS TASEAFSNLS PRDECKIEFS EVANAALRQN DALVKEKIAM RKRFLKFKER 660 VITLKLKAFH HLWKEDMRLL SIRKYRAKSQ KKYELNLRIT HSGYQKNRSS IRSRVSSLVG 720 NLRLVPTTEM LNFTSKLLSV SQLKLCRNAL KMPALILDKK ERIGSRFISS NGLVEDPCAI 780 EKERAMINPW SSEERETFID KLATYGKDFR KIASFLDHKT TADCVEFYYK NHKSDCFEKT 840 KKSKQSKSSA NYLVASGKNW SREMNAASLD ILGAATVIAA DVDNGMGNQQ THSGRFYLGG 900 YCNSKPSHGG DGNVDRSSNV DILQNERETV AADVLAGICG SMSSEAMSSC ITTSVDPGEG 960 CREWKSQKVD FVKKRSLMAD VTQNVDEETC SDESCEEMDP AVWTDEEKSI FIRAVSSYGK 1020 DFAMISRCVR TRSRDQCKAF FSKARKCLSL DSIHPGPGNL GTPLSDDANG GGGGSDTEDG 1080 GALESGSVIC SDKLGSKMDD SLPLPVMDSK FEESDVVERK NLTTGLNRSK DSNVTTQLGE 1140 NDTRNEKTFV SDACQMDCQP EQTFDIENNG FVRQSELMQA QEISNESVSS EAGIGKPIED 1200 ISVGDTVDPG PSNPVAAVDV KAIVGVSANA NVNHLGAEEI LLLENNLNHQ SGLLQDSNAS 1260 RDVSHQPLDM GSCSNFSLAM ENTHHASMEF KSVEKSPVVS LLQENKPATA NSVLQDSAAI 1320 QFRKLSSQLD IQEERDEQGQ KLVSGDNHLQ NLPGQCLVSS NESSQILRGY PLQIPTKRET 1380 NGDISCRPLP EVQSLSTSER NAGNQFVGQD CYLQSCNVSQ DQYSVPKIPL LSHHTEQGND 1440 HSRDQSRSLS EMEKPCRNGD VKLFGQILTN PSSSQKQNPS INENVELGTH CPKPGSKSST 1500 LKFTGHQTTD GSSSVLKFDS NNYRGLENVP VKSYGFWDGN KIQTGFSSLP EYFLAKYPAA 1560 FGNYHVPSLK MEQQALQAAV KCNDHNLNSV SVLPPREISG SNGVVDYHIY RSHDSSNVLP 1620 YSVDMKQRQD IFSEMPRRNG FDSISSLQEQ GRGMVGMNVV GRAGVLVGGP CTGVSDPVAA 1680 LKMHYSKTEQ YGGQNGSTIR EEESWRSKGD IGR

Sequence ? help Back to Top

Protein Sequence Length: 1713 aa Download sequence

MPPERLPGDR KDFFKERKPR WRESASGHYG SSRDISRWGG SNEFRRPPGY VKLGAWHPFA  60
EESGHGYAPF RSSDRILEEK NFRPSVSRGD SKYGRNGRDN RGSFSQRDWR THSWELNNGS  120
PNAPGRLHDA STVQRSLDDT VSYPSSHHHS EFMNTWEQLH SKDHHDNGKM VVVNGMGTGQ  180
RGDRENSLDW KPLNKWTRSG SLSSRGSGFS HSSSSKSLGG ADSCEGKAEL QLKNASLVQS  240
PSGDAAACVT SAPSEEMAAR KKPRLNWGEG LAKYEKKKVE GPEVNLSKDG VVVSSSNIEP  300
IQSQSSNLVE KSPQVMGLSD CASPTTPSSV ACSSPGVEEK TSGKGISPDN LCGSPSIGSQ  360
SHIEGLSFNL EVLDATSVAN LGALLVELLQ SDDSSSVDSS FIRSTAMNKL LVLKGGTSKA  420
LEVTESEIDL LENELKSLKF ESGSRFPCLA ASSSFPLVDE VKLCSEQGAA ASIPRPSPLQ  480
VSFCGAGDVE KIPICNGVLE VVHGGSKDDD VDSPGTATSK FVESVSMVKA VSSFDLVKQD  540
AHSADGGVIQ TATLLKSVLP CTSEQVNAPT CMDVNLLTES KEGASFPSDA SCAEDNLCNL  600
ILAANKESAS TASEAFSNLS PRDECKIEFS EVANAALRQN DALVKEKIAM RKRFLKFKER  660
VITLKLKAFH HLWKEDMRLL SIRKYRAKSQ KKYELNLRIT HSGYQKNRSS IRSRVSSLVG  720
NLRLVPTTEM LNFTSKLLSV SQLKLCRNAL KMPALILDKK ERIGSRFISS NGLVEDPCAI  780
EKERAMINPW SSEERETFID KLATYGKDFR KIASFLDHKT TADCVEFYYK NHKSDCFEKT  840
KKSKQSKSSA NYLVASGKNW SREMNAASLD ILGAATVIAA DVDNGMGNQQ THSGRFYLGG  900
YCNSKPSHGG DGNVDRSSNV DILQNERETV AADVLAGICG SMSSEAMSSC ITTSVDPGEG  960
CREWKSQKVD FVKKRSLMAD VTQNVDEETC SDESCEEMDP AVWTDEEKSI FIRAVSSYGK  1020
DFAMISRCVR TRSRDQCKAF FSKARKCLSL DSIHPGPGNL GTPLSDDANG GGGGSDTEDG  1080
GALESGSVIC SDKLGSKMDD SLPLPVMDSK FEESDVVERK NLTTGLNRSK DSNVTTQLGE  1140
NDTRNEKTFV SDACQMDCQP EQTFDIENNG FVRQSELMQA QEISNESVSS EAGIGKPIED  1200
ISVGDTVDPG PSNPVAAVDV KAIVGVSANA NVNHLGAEEI LLLENNLNHQ SGLLQDSNAS  1260
RDVSHQPLDM GSCSNFSLAM ENTHHASMEF KSVEKSPVVS LLQENKPATA NSVLQDSAAI  1320
QFRKLSSQLD IQEERDEQGQ KLVSGDNHLQ NLPGQCLVSS NESSQILRGY PLQIPTKRET  1380
NGDISCRPLP EVQSLSTSER NAGNQFVGQD CYLQSCNVSQ DQYSVPKIPL LSHHTEQGND  1440
HSRDQSRSLS EMEKPCRNGD VKLFGQILTN PSSSQKQNPS INENVELGTH CPKPGSKSST  1500
LKFTGHQTTD GSSSVLKFDS NNYRGLENVP VKSYGFWDGN KIQTGFSSLP EYFLAKYPAA  1560
FGNYHVPSLK MEQQALQAAV KCNDHNLNSV SVLPPREISG SNGVVDYHIY RSHDSSNVLP  1620
YSVDMKQRQD IFSEMPRRNG FDSISSLQEQ GRGMVGMNVV GRAGVLVGGP CTGVSDPVAA  1680
LKMHYSKTEQ YGGQNGSTIR EEESWRSKGD IGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein