PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021658864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27979.7 Da PI: 8.1124 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.9 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021658864.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 99.4 | 5.1e-33 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++ ++++qe+ kLk+++e Lqr+qR+llGedL++L+ +L+qLe+qL++slk+iRs+K++++l+ ++elq+ke++l e+n+aLrkklee XP_021658864.1 82 QSMHDIQNCYQEYLKLKEKVEALQRSQRNLLGEDLGDLNTTDLKQLEHQLDSSLKQIRSTKTQFMLDRLSELQRKEESLLETNNALRKKLEE 173 566788***********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SSMAKTIEKY HRCSYAPLEA NQSMHDIQNC YQEYLKLKEK VEALQRSQRN LLGEDLGDLN 120 TTDLKQLEHQ LDSSLKQIRS TKTQFMLDRL SELQRKEESL LETNNALRKK LEETDAALQS 180 SWEAREQCVQ YNHQPTQPDD FANPLQCNRN LRIGSNADER DKVTIATTEQ NFNGFIPAWM 240 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 2e-98 | MIKC_MADS family protein |