PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658595.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 333aa MW: 37240.8 Da PI: 7.4371

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	137.1	6.5e-43	34	133	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvh++FGasnv kll++l++ +reda++sl+yeAear+rdPvyG+vg+i+ lq++l++l+++l XP_021658595.1 34 PCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHRVFGASNVAKLLNELNTVQREDAVNSLAYEAEARLRDPVYGCVGLISILQHRLKELQSDLY 128 7********************************************************************************************99 PP DUF260 96 llkee 100 +k+e XP_021658595.1 129 NAKKE 133 98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MKLPRILHAS FSVIQPFNAS SVENRKKMST PNSPCAACKF LRRKCTQECV FAPYFPPDQP 60 QKFANVHRVF GASNVAKLLN ELNTVQREDA VNSLAYEAEA RLRDPVYGCV GLISILQHRL 120 KELQSDLYNA KKELAQYIGP QAMLPTLQTQ AYMPQTRAGT THLGNPTASS LMQHGALPIM 180 SVPSQPTHGG QLVIHEPQQQ QQQQQQHQNQ IFEAQQFAAA LAAREHQDMF RAYEQQQEIV 240 RFNRGFDISD TVTTTGFNQI TVAAMSPSLA LGSFDTSYQV QPQQVDHHQH HQLQAQLFLQ 300 PQQAQPQPHE QQQTQQQHQP SGSDEGGSIG PSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	9e-81	LBD family protein