PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658403.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 382aa MW: 41653.3 Da PI: 8.2586

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.1	1.9e-41	89	166	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dls++++yhrrhkvCe hsk+p+v+++g+eqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+ XP_021658403.1 89 TCLVDGCTSDLSKCRDYHRRHKVCELHSKTPKVFIKGQEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQP 166 5**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGYNLKTSWR LAELDNQNIP HIAQTTVSSC LGVQQATGHC SVDLKLGNSS DLEDKLEKFA 60 GPEDSLMESS SSGSSKRVRT PSGANQVPTC LVDGCTSDLS KCRDYHRRHK VCELHSKTPK 120 VFIKGQEQRF CQQCSRFHSL VEFDEGKRSC RKRLDGHNRR RRKPQPDSLS VNSARLLSNR 180 QGTRYLRFGG SQMFSTSPES TAWNGAVKPE NDPMLYTSQS SLDFSSGKNL FPGSLSHGYR 240 SGKQFPFLQC TSSALLGESV CQSIFNADST LGSTCSSQKM FSDGPNRFLD SNRALSLLSS 300 PSAETREIGL SHMAQPNLNP QAQSPISNLN FSCLGMESGP VNSVLVSDGG SNANLHGQDV 360 FQIGPEGSST SGSLQPLSFS WE

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGYNLKTSWR LAELDNQNIP HIAQTTVSSC LGVQQATGHC SVDLKLGNSS DLEDKLEKFA  60
GPEDSLMESS SSGSSKRVRT PSGANQVPTC LVDGCTSDLS KCRDYHRRHK VCELHSKTPK  120
VFIKGQEQRF CQQCSRFHSL VEFDEGKRSC RKRLDGHNRR RRKPQPDSLS VNSARLLSNR  180
QGTRYLRFGG SQMFSTSPES TAWNGAVKPE NDPMLYTSQS SLDFSSGKNL FPGSLSHGYR  240
SGKQFPFLQC TSSALLGESV CQSIFNADST LGSTCSSQKM FSDGPNRFLD SNRALSLLSS  300
PSAETREIGL SHMAQPNLNP QAQSPISNLN FSCLGMESGP VNSVLVSDGG SNANLHGQDV  360
FQIGPEGSST SGSLQPLSFS WE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	164	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-52	SBP family protein