PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657962.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

G2-like

Protein Properties

Length: 420aa MW: 47202.7 Da PI: 8.212

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88	9e-28	245	300	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.kYRl 55 k+r+rW+++LHe+Fv +v++LGG+ kAtPk+il+lm+ +gLt+ hvkSHLQ kYR+ XP_021657962.1 245 KTRIRWNQDLHEKFVMCVNRLGGAGKATPKAILKLMDTDGLTIFHVKSHLQvKYRI 300 68*************************************************99997 PP
2	Myb_DNA-binding	36.5	1.1e-11	249	295	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 rW ++++e++v +v++lGg t+k+I + m g+t ++ks++q XP_021657962.1 249 RWNQDLHEKFVMCVNRLGGAgkaTPKAILKLMDtDGLTIFHVKSHLQ 295 9***************99************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MNTSKMDCQE RIRQNHGPIG DFALQSSQCF GNQQSWNMGI RMQQPVMEAG LQQQNHRPDK 60 SSSSIMSRFE SPASAFYATE RYMGFPQYDC QVDAPPWCFP YSKPYDSQLP SQQSSRESFA 120 IDSGEQADHN LDLRSNLQPI VKSHFSDDHY YKSYKGPCSS SSGNKRHLFE RNKLLNNGAA 180 SIGSQFSIPY QGDQDHRVGS NPCTSPFSQL GFSSRQEIQS PRFSSAGASA CSGKTEATGA 240 VISSKTRIRW NQDLHEKFVM CVNRLGGAGK ATPKAILKLM DTDGLTIFHV KSHLQVKYRI 300 AKYMPDPSEG KPEKRTSIND VSPINAKTSG MQITEALQLQ LDVQRRLHEQ LEIQKNLQLR 360 IEEQGRQLKM MFDQQQRTSS IFRNQNLDST SPDEPAFSLE DIEASIIEGS NSTQFPSKIS

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MNTSKMDCQE RIRQNHGPIG DFALQSSQCF GNQQSWNMGI RMQQPVMEAG LQQQNHRPDK  60
SSSSIMSRFE SPASAFYATE RYMGFPQYDC QVDAPPWCFP YSKPYDSQLP SQQSSRESFA  120
IDSGEQADHN LDLRSNLQPI VKSHFSDDHY YKSYKGPCSS SSGNKRHLFE RNKLLNNGAA  180
SIGSQFSIPY QGDQDHRVGS NPCTSPFSQL GFSSRQEIQS PRFSSAGASA CSGKTEATGA  240
VISSKTRIRW NQDLHEKFVM CVNRLGGAGK ATPKAILKLM DTDGLTIFHV KSHLQVKYRI  300
AKYMPDPSEG KPEKRTSIND VSPINAKTSG MQITEALQLQ LDVQRRLHEQ LEIQKNLQLR  360
IEEQGRQLKM MFDQQQRTSS IFRNQNLDST SPDEPAFSLE DIEASIIEGS NSTQFPSKIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	3e-72	G2-like family protein