PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021657951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | GRF | ||||||||
Protein Properties | Length: 406aa MW: 43910.9 Da PI: 8.4783 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 80.5 | 1.5e-25 | 153 | 196 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_021657951.1 153 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 196 79***************************************987 PP | |||||||
2 | QLQ | 53 | 1e-18 | 82 | 117 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 F+ aQ+q+L+ Q+l+y+y++a++ vPpeLlq+i+k XP_021657951.1 82 CFSLAQWQELELQALIYRYMLAGAAVPPELLQPIKK 117 69********************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 406 aa Download sequence |
MDFHLKQWRT QQHESEEQPS AKMPKLLLNP YQPQPQPQHP SASTASLPLF VPESNNKLSN 60 LSALPDSTPA ATTRFPRMEG SCFSLAQWQE LELQALIYRY MLAGAAVPPE LLQPIKKSVL 120 RSPPYFLHHP LQHYSYYQPT LLQTGYWGRA AMDPEPGRCR RTDGKKWRCS RDVVAGQKYC 180 ERHVHRGRNR SRKPVEIPTP TSSTTTTTIG TSGGGTGGVA GAAFNSTTSI VAPPLGAVTN 240 GASFPFSGQS PSTDLLHLNN GSSDSKTEIK GLLGPEKEVA NRNNGHILRH FFDDWPRSHQ 300 EPDSAGSNAS PMNSATCLSI SMPENSPSDV SLKLSTGNGE EPAGPRGNER EHPQVSWTGG 360 WGTSQVASMG GPLAEALRSS TSNSSPTSVL HQLPPGSASE PSFVST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G52910.1 | 1e-80 | GRF family protein |