PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021657869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 883aa MW: 98062 Da PI: 8.6483 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.1 | 1.2e-06 | 165 | 184 | 5 | 25 |
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 lC++fa G C++G+ C+F H XP_021657869.1 165 LCKDFAV-GRCRRGSHCQFLH 184 9******.************* PP | |||||||
2 | zf-CCCH | 17.5 | 7.5e-06 | 225 | 244 | 6 | 26 |
-SGGGGTS--TTTTT-SS-SS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHg 26 C++f++ G C++G++C+F+H XP_021657869.1 225 CNDFLK-GNCRRGASCRFSHH 244 ******.*************6 PP | |||||||
3 | zf-CCCH | 18.9 | 2.6e-06 | 287 | 307 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+ffa+ G C+ G C+F+H XP_021657869.1 287 VPCKFFAA-GNCRNGKYCRFSH 307 59**9999.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 883 aa Download sequence |
MSGSGRRRSS KWDLKEESRI PFDNVNENAW SGKAGLSFHD KESQHDWLSP EGASSTRAKW 60 PVLEPLSGRR GSHRDDSIDE ERNRSLKAMA TWDGDESYGT RMSPGLDEWR QQNRRNSPKS 120 EWKRSRRSRS RSESRSRSRS PVRGFGRESG LYERSRSRSG VSAQLCKDFA VGRCRRGSHC 180 QFLHQGNQSY VDGWERHRRT VTSKYPTPHD SRDYPSVSGR SVDCCNDFLK GNCRRGASCR 240 FSHHVTSNVT VKESSNDVTR DKNSDRRHRD ASPEKRSDRE TYRASDVPCK FFAAGNCRNG 300 KYCRFSHQDL AHVSPDRSRD GRRSLDQNTD DVAKLWNGPK WGATSALDAG KLSGDKNVTI 360 GTPDQRGTAR AVGDKWGHCL EEDKTLGNAP IDHKMVKSET DLTWNTENAS DNMVASEQRP 420 GGENWLGDMD MSPEWNYKFR HSNHFDKLAS LTSCNPSITR EVSDHAHDVT AVVPSLTNES 480 SAKPQDYKLK DVGANAVPHD DNSVTGKTAS SHSSISANII SAQSLDQNGM NSNALHLSGL 540 NVIGQGQVTI PTSGGGNVNP QDQMLLQEGK TINKPDNDGD ANASQMNSGV SMTQKLVSNS 600 EQLTQLTNIS ASLAHLLANG KQLPHLFAVH NSNAHNYTET SSIVNTEELV KPDSAVTTES 660 NQNVGLRKQY DPICDSLDAE KNVVNYNPPG FSQNFVIEKK VVDGKPEMSS KSLSPSVAGA 720 PKAGDYNKFH SLQEPDGKSY QVNEMEPGAN SIVTKENNGV VTEESRKVEE DKTAQENDVL 780 ENIDGDGKTD EGKQSKDVKG IRAFKFALVE FVKELLKPKW KEGQMTKDAY KNVVKKVVDK 840 VTGSMQGGTI PQTQERIQQY LSFSKPKLTK LVQAYVEKFQ KDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33835.1 | 3e-13 | C3H family protein |