PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657624.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 734aa MW: 82508.4 Da PI: 6.7926

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	69.8	3.6e-22	128	229	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++ +++a+e+ +++++ ++l+ +d+ g++W +++i+r++++r++l++GW+ Fv+a++L +gD ++F ++++ XP_021657624.1 128 FCKTLTASDTSTHGGFSVLRRHADEClppldmSLQPPA-QELVARDLLGNEWHFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDAFIFL--RSEN 219 99***************************9666665.59********************************************..4589 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +e +v+v+r+ XP_021657624.1 220 GEIRVGVRRA 229 999**996 PP
2	Auxin_resp	119.1	3.5e-39	254	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st+++F+v+Y+Pr+s++eF+++v+k+ +++k+++++GmRfkm+fe e+++e+r+sGtv+gv+++dp rWp SkWr+Lk XP_021657624.1 254 AWHAVSTGTMFTVYYKPRTSPAEFIIPVDKYAESVKNSFTIGMRFKMRFEAEEAPEQRFSGTVIGVENTDPERWPASKWRCLK 336 89*******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MTIAGSSADN DGNGIVVADS GDELYRELWH ACAGPLVTVP RRGELIYYFP QGHIEQVQAS 60 TNQVADQQMP SYNLPAKILC RVVNVQLKAE PDTDEVFAQI TLLPQLEQAE KLVEEALPSP 120 TRPRVHSFCK TLTASDTSTH GGFSVLRRHA DECLPPLDMS LQPPAQELVA RDLLGNEWHF 180 RHIFRGQPRR HLLQSGWSLF VSAKKLVAGD AFIFLRSENG EIRVGVRRAM RQPSNVPPSV 240 ISSHSMHIGI LATAWHAVST GTMFTVYYKP RTSPAEFIIP VDKYAESVKN SFTIGMRFKM 300 RFEAEEAPEQ RFSGTVIGVE NTDPERWPAS KWRCLKVRWD ETSPLHRPER VSPWEIEPAL 360 APLGPLPVCR IKRSRSNMAM PSADSAAVIK KDNGLSRDLK DQENATLRGT LAVSKYQETT 420 QNPTGWSSSQ VRDQNGTSFG KRRFGHESRN PQVVPGEKYM NSSLGQGPSF NMFESRMEPH 480 ALKDKEMQCH TSLNMEVDYQ TGRWILPQGY AGNSALAAQK LHPLSVQQHE EVKSKGDGNC 540 KLFGISLMSN PVPTEPAMLH EKLMLRPKGQ FDNASDHLQD LGSNLSLQQL LHPKCSERVI 600 RHEEEQNSFL TRRCVKVQKQ GIGVGRCVDL TKFNGYDEFM AELDQIFEFN GELIASNKNW 660 LVVFTDDEGD MMLVGDDPWQ EFCSMVHGIF VYTREEINRM NSRSLNTYLE ENSSIADHIA 720 GKIDQKHLPT VSTT

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MTIAGSSADN DGNGIVVADS GDELYRELWH ACAGPLVTVP RRGELIYYFP QGHIEQVQAS  60
TNQVADQQMP SYNLPAKILC RVVNVQLKAE PDTDEVFAQI TLLPQLEQAE KLVEEALPSP  120
TRPRVHSFCK TLTASDTSTH GGFSVLRRHA DECLPPLDMS LQPPAQELVA RDLLGNEWHF  180
RHIFRGQPRR HLLQSGWSLF VSAKKLVAGD AFIFLRSENG EIRVGVRRAM RQPSNVPPSV  240
ISSHSMHIGI LATAWHAVST GTMFTVYYKP RTSPAEFIIP VDKYAESVKN SFTIGMRFKM  300
RFEAEEAPEQ RFSGTVIGVE NTDPERWPAS KWRCLKVRWD ETSPLHRPER VSPWEIEPAL  360
APLGPLPVCR IKRSRSNMAM PSADSAAVIK KDNGLSRDLK DQENATLRGT LAVSKYQETT  420
QNPTGWSSSQ VRDQNGTSFG KRRFGHESRN PQVVPGEKYM NSSLGQGPSF NMFESRMEPH  480
ALKDKEMQCH TSLNMEVDYQ TGRWILPQGY AGNSALAAQK LHPLSVQQHE EVKSKGDGNC  540
KLFGISLMSN PVPTEPAMLH EKLMLRPKGQ FDNASDHLQD LGSNLSLQQL LHPKCSERVI  600
RHEEEQNSFL TRRCVKVQKQ GIGVGRCVDL TKFNGYDEFM AELDQIFEFN GELIASNKNW  660
LVVFTDDEGD MMLVGDDPWQ EFCSMVHGIF VYTREEINRM NSRSLNTYLE ENSSIADHIA  720
GKIDQKHLPT VSTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	0.0	ARF family protein