PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657344.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 241aa MW: 24942.3 Da PI: 8.0168

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	130.7	6.4e-41	27	127	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael XP_021657344.1 27 PCGACKFLRRKCVPGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAEL 121 7*********************9989***************************************************************** PP DUF260 95 allkee 100 ++l+++ XP_021657344.1 122 SYLQAH 127 *99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MSATANPSSS GGSGGGGGSS SSCGSGPCGA CKFLRRKCVP GCIFAPYFDS EQGAAHFAAV 60 HKVFGASNVS KLLLHIPVHK RLDAVVTICY EAQARLRDPV YGCVAHIFAL QQQVVNLQAE 120 LSYLQAHLAT LELPSPPPPP PPPPTMVTPP PLSIADLPSA SSVPATYDLS SLFDPLIQPS 180 WAMQQRQMDP RQFGGSPGST SVTGGGGDLQ SLARELLHRH GSPPQGSMPC TGSLSSPSSS 240 K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	2e-83	LBD family protein