PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021657088.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family TCP
Protein Properties Length: 392aa    MW: 44290.6 Da    PI: 8.7881
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021657088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP135.74e-421242783133
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasn 84 
                      k+drhskihT++g+RdRR+Rls+++a++fFdLqd+L fdk+skt+eWLl qa paik+l +              s+ss sec   + +s  + 
  XP_021657088.1 124 SKRDRHSKIHTAQGPRDRRMRLSLKVAREFFDLQDKLRFDKASKTVEWLLIQARPAIKKLSSGvpqlnysfsvgtkSASSTSEC---EVVSGIDD 215
                     69************************************************************99*9***999965544444555...33333332 PP

             TCP  85 sssg..............kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                     + ++               ++ +++ +k ++++++++  lakesr+karararertrek   +
  XP_021657088.1 216 EAAAikattkisnvktssPSCVNNKGKKAKPSRKSAFDPLAKESREKARARARERTREKLWSR 278
                     222244455566777776666777755566666666899********************8665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MFPSSNNGND PICYSDQQEG HNRPFFNDIT LNSKHDEFPF SFFHLPSSFL SSDQLELQDH  60
DFFLHQSHDL LLHHHHQPLI RALASTTGAA SVETILDMVD SNKNDANKKS HIASSDQIQR  120
KRSSKRDRHS KIHTAQGPRD RRMRLSLKVA REFFDLQDKL RFDKASKTVE WLLIQARPAI  180
KKLSSGVPQL NYSFSVGTKS ASSTSECEVV SGIDDEAAAI KATTKISNVK TSSPSCVNNK  240
GKKAKPSRKS AFDPLAKESR EKARARARER TREKLWSRRI DESKPCEEAK NHELNQLTYC  300
IPFETGEESG TQTHTMNPNP LEMLAREVKA PSSHEQARLV TTEGMTDDSL VIMGKWSPYA  360
SIINHLCNTA MPQEHQGTNL QSLFKSWEAY NS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.21e-19TCP family protein