PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656775.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-X1

Protein Properties

Length: 1103aa MW: 120088 Da PI: 8.06

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	24.1	8e-08	291	309	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+k+CH GpC+pC+ XP_021656775.1 291 CGRHQCEKICHVGPCDPCQ 309 ******************6 PP
2	zf-NF-X1	17.4	1e-05	355	372	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C+++CH+GpC+ C XP_021656775.1 355 CGNHECGETCHPGPCGDC 372 ****************99 PP
3	zf-NF-X1	19.6	2e-06	413	430	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C+++CH G+CppC XP_021656775.1 413 CGIHHCKEICHAGDCPPC 430 ****************** PP
4	zf-NF-X1	18.6	4e-06	509	527	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++lCH G CppC XP_021656775.1 509 CGQHSCESLCHSGHCPPCL 527 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1103 aa Download sequence
MSFPSRNDQR DRTSRFPNQH ARQTWVPRGS GPTAVVNPPS RFDSTPNGIG SVRFNHTTAP 60 PNPRHSGNGN ASRSRKPWPT NHRRDREKEK DTSQTQEVKD LKDPNLPQLV QEIRDKLVKG 120 TVECMICYDM VQRSASIWSC PSCYSIFHLN CIKKWARAPT SIDLSAEKSQ GFNWRCPGCQ 180 SVQLTSLKEI RYVCFCMKRT EPPSDLYLTP HSCGEPCGKP LERRVPGAGE SKDDLCPHVC 240 VLQCHPGPCP PCKAFAPPRV CPCGKKLITT RCSDRMSVLT CGQHCDKLLE CGRHQCEKIC 300 HVGPCDPCQV LVYASCFCRK KVETILCGDI AVKGEVKAED GVFSCNLTCK KMLCCGNHEC 360 GETCHPGPCG DCDLMPGRVE SCYCGKTSLQ VERKSCLDPI PNCTQICGKP LPCGIHHCKE 420 ICHAGDCPPC LVLVTQKCRC GSTSRTVECF KTIAENEKFT CEKPCGRKKN CGRHRCSERC 480 CPLSNPHNLL SGDWDPHFCQ MACGKKLRCG QHSCESLCHS GHCPPCLETI FTDLSCACGR 540 TSIPPPLPCG TPPPSCQLPC SVPQPCGHSA SHSCHFGDCP PCSVPIAKEC VGGHVVLGNI 600 PCGSKDIRCN KLCGKTRRCG LHACGRTCHP PPCDTSSVTE AGSRASCGQT CGAPRRDCRH 660 TCTALCHPSA SCPDVRCEFP VTITCSCGRI TASVPCDAGG SNSGFNADTV FEASIVQKLP 720 VPLQPAESTG KKIPLGQRKL VCDDECAKLE RRRVLADAFD ITPPNLEALH FGENSAVTEL 780 LSDLYRRDPR WVLAVEERCK YLVLGKNRGS INGLKLHVFC PMLKDKRDAV MLIADRWKLA 840 VYAAGWEPKR FIVVHVTPKS KSPSRVIGVK GTTTLTAPHP PAFDPLVDMD PRLVVSFPDL 900 PREADISSLV LRFGGECELV WLNDKNALAV FNDPARAATA MRRLDHGSVY HGAVAVLQSV 960 GASAAPVSNP WGVSGNTKGG GAAAAFKPGK KAVVPEHGWR EDSWGSEEWC HGSVDVQASA 1020 WKGKEAPIAA TINRWSALDS ESISKASTTS IRTEDPAKRA SNLGIESNSS IFSSPERLGG 1080 ILSQVELSEV VDDWEKAYDT YNM

Sequence ? help Back to Top

Protein Sequence Length: 1103 aa Download sequence

MSFPSRNDQR DRTSRFPNQH ARQTWVPRGS GPTAVVNPPS RFDSTPNGIG SVRFNHTTAP  60
PNPRHSGNGN ASRSRKPWPT NHRRDREKEK DTSQTQEVKD LKDPNLPQLV QEIRDKLVKG  120
TVECMICYDM VQRSASIWSC PSCYSIFHLN CIKKWARAPT SIDLSAEKSQ GFNWRCPGCQ  180
SVQLTSLKEI RYVCFCMKRT EPPSDLYLTP HSCGEPCGKP LERRVPGAGE SKDDLCPHVC  240
VLQCHPGPCP PCKAFAPPRV CPCGKKLITT RCSDRMSVLT CGQHCDKLLE CGRHQCEKIC  300
HVGPCDPCQV LVYASCFCRK KVETILCGDI AVKGEVKAED GVFSCNLTCK KMLCCGNHEC  360
GETCHPGPCG DCDLMPGRVE SCYCGKTSLQ VERKSCLDPI PNCTQICGKP LPCGIHHCKE  420
ICHAGDCPPC LVLVTQKCRC GSTSRTVECF KTIAENEKFT CEKPCGRKKN CGRHRCSERC  480
CPLSNPHNLL SGDWDPHFCQ MACGKKLRCG QHSCESLCHS GHCPPCLETI FTDLSCACGR  540
TSIPPPLPCG TPPPSCQLPC SVPQPCGHSA SHSCHFGDCP PCSVPIAKEC VGGHVVLGNI  600
PCGSKDIRCN KLCGKTRRCG LHACGRTCHP PPCDTSSVTE AGSRASCGQT CGAPRRDCRH  660
TCTALCHPSA SCPDVRCEFP VTITCSCGRI TASVPCDAGG SNSGFNADTV FEASIVQKLP  720
VPLQPAESTG KKIPLGQRKL VCDDECAKLE RRRVLADAFD ITPPNLEALH FGENSAVTEL  780
LSDLYRRDPR WVLAVEERCK YLVLGKNRGS INGLKLHVFC PMLKDKRDAV MLIADRWKLA  840
VYAAGWEPKR FIVVHVTPKS KSPSRVIGVK GTTTLTAPHP PAFDPLVDMD PRLVVSFPDL  900
PREADISSLV LRFGGECELV WLNDKNALAV FNDPARAATA MRRLDHGSVY HGAVAVLQSV  960
GASAAPVSNP WGVSGNTKGG GAAAAFKPGK KAVVPEHGWR EDSWGSEEWC HGSVDVQASA  1020
WKGKEAPIAA TINRWSALDS ESISKASTTS IRTEDPAKRA SNLGIESNSS IFSSPERLGG  1080
ILSQVELSEV VDDWEKAYDT YNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein