PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021656754.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 297aa    MW: 31031.1 Da    PI: 9.8235
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021656754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.51.7e-063760225
                    -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                    k ++C  f+ t  C++G++C+F H
  XP_021656754.1 37 KSKPCTKFFSTAGCPFGESCHFLH 60
                    7789******************** PP
2zf-CCCH25.13.1e-08102127227
                     -S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                     k++lC+ +  +  Ck+Gd+C+FaHg+
  XP_021656754.1 102 KRRLCNKYNSSEGCKFGDKCHFAHGE 127
                     89**********************96 PP
3zf-CCCH33.47.4e-11264288126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     ykt++C +f++ G C++G rC+FaHg
  XP_021656754.1 264 YKTKICENFSK-GSCSFGQRCHFAHG 288
                     9**********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MMDVRKRGRP EAGFNANGGL KKSKHEMDSL STGVGSKSKP CTKFFSTAGC PFGESCHFLH  60
YVPGGYNAVA QMMNLGPAVT PVSRNLAVPS VVPNGSASTA VKRRLCNKYN SSEGCKFGDK  120
CHFAHGEWEL GKPIASSHED ARAIGTIPGR MGGRMEPPSP GLAASFGASA TAKISVEASL  180
AGAIIGKGGV NSKQICRQTG AKLSIREHET DPNLRNIEFE GSFEQIKQAS AMVSELIASV  240
SSANASAKTT GVPGGGHAHP GSNYKTKICE NFSKGSCSFG QRCHFAHGAA ELRKSGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.11e-65C3H family protein