PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656229.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 432aa MW: 48394.2 Da PI: 9.506

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.2e-05	199	221	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F +nL+ H ++ H XP_021656229.1 199 SCPECGEIFVKAENLELHRSVrH 221 8*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MAKPKAPIKP INKIHQNQNQ QPQRSEKPPS WLAVRGLFTC KDLQRQQQQE LKHPKQEKQE 60 QQQQHKEEKH HQHQEQALEE TSKKCKKIKC SSSLCNNTKV MHRPETASPE VRRKRASMGL 120 TSNNGSSGRS MKDSLNEING VPSFYKSSLS VSSNSSINNA GSFKGLPFRR LYGCYECRMV 180 VDPVLGFTRD PSLRSSICSC PECGEIFVKA ENLELHRSVR HAVSELGLED TSKNIVEIIF 240 QSSWLKKEVP VCQIDRILKV HNTQRTISKF EEYRDSIKAK ATKLPKKHPR CIADGNELLR 300 FYCTSFACSL GLNGSSNLCN SIPHCNVCSI IKNGFKESTI GGVNGNRILT TATSGKAHDK 360 AAISEESNGN SDKRAMLVCR VIAGRVKKSV EGNMEEYDSV AGAEGVYSNL EELYVFNARA 420 ILPCFVVIYR GF

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MAKPKAPIKP INKIHQNQNQ QPQRSEKPPS WLAVRGLFTC KDLQRQQQQE LKHPKQEKQE  60
QQQQHKEEKH HQHQEQALEE TSKKCKKIKC SSSLCNNTKV MHRPETASPE VRRKRASMGL  120
TSNNGSSGRS MKDSLNEING VPSFYKSSLS VSSNSSINNA GSFKGLPFRR LYGCYECRMV  180
VDPVLGFTRD PSLRSSICSC PECGEIFVKA ENLELHRSVR HAVSELGLED TSKNIVEIIF  240
QSSWLKKEVP VCQIDRILKV HNTQRTISKF EEYRDSIKAK ATKLPKKHPR CIADGNELLR  300
FYCTSFACSL GLNGSSNLCN SIPHCNVCSI IKNGFKESTI GGVNGNRILT TATSGKAHDK  360
AAISEESNGN SDKRAMLVCR VIAGRVKKSV EGNMEEYDSV AGAEGVYSNL EELYVFNARA  420
ILPCFVVIYR GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	5e-98	C2H2 family protein