PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021656006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 218aa MW: 24041.8 Da PI: 4.8185 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 126.4 | 1.4e-39 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC ++Cv+apyf+ +q + +fa+vhk+FGasnv+kll +lp ++r+da+ ++ yeA ar+rdPvyG+v++i++lqqq+++l++e+ XP_021656006.1 7 SCGACKFLRRKCMSECVFAPYFCYDQaATHFAAVHKVFGASNVSKLLLHLPVQNRSDAAITISYEALARMRDPVYGCVAHIFALQQQIASLQEEI 101 6************************9789****************************************************************** PP DUF260 95 allkee 100 + l+++ XP_021656006.1 102 EILGHQ 107 *99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MIGPGSSCGA CKFLRRKCMS ECVFAPYFCY DQAATHFAAV HKVFGASNVS KLLLHLPVQN 60 RSDAAITISY EALARMRDPV YGCVAHIFAL QQQIASLQEE IEILGHQMAS LTVGIASHGS 120 SQTTSTPNCE IQISSLQDAI NMKYYENQSA AQVNNSGYAT GNQASDSQMD AQLPPFYEWE 180 HQNPSCESHP NSLDRLLEEV EQEIFPYCSW FDSGNNAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06080.1 | 7e-60 | LBD family protein |