PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655895.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 1724aa MW: 193872 Da PI: 5.4324

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.3	1.3e-18	29	85	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++++ + yps+++r++L++klgL++rq ++WF+ rR k+kk XP_021655895.1 29 RPKRQMKTPFQLEALEKAYALEAYPSEAMRADLSQKLGLSDRQLQMWFCHRRLKDKK 85 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1724 aa Download sequence
MESNSEGENQ NRGSSANNNI GNSNEGHSRP KRQMKTPFQL EALEKAYALE AYPSEAMRAD 60 LSQKLGLSDR QLQMWFCHRR LKDKKETPAK KPRKAVPLES PVEEMRAMAP EPEPEPGSDY 120 GSGSGSGSSP FMEPRKVSLD DMPMIRRYYE SSPQSVMELR AIACVEAQLG EPLREDGPIL 180 GMEFDPLPPD AFGAPIAMAE QQKRPMHSYA GEVYERHDAK SSKVSARAFH EYQFLQDQSS 240 IRSDAYGQVD QSPYRDPSVD IPRGKASIIH EDEPLAKVQG VRHLSQPDKK GHALSSLHRD 300 DDYLLHHESV TNNRIDLRIG KKCKNDEARI TREVEARENQ IRKELEKQDQ LRRKSEERMR 360 KEMEKQERER RKEEDRLIRE RQREEERSLR EQKRELERRE KFLQKEYLRA EKKRQKEELR 420 REKEAVKRQA AIEKATARRI AKESLDLIED EQLELMELAA ASKGLTSVVH LNYDTLQNLD 480 SFRDSLSIFP PESIQLKKPF AIQPWMDSEE NIGNLLMVWK FFITFADVLG LWPFTLDEFV 540 QAFHDYDSRL LGEVHLALLK LIIKDIEDVA RTPSTGLGAN QYCAANPEGG HLQIVEGAYI 600 WGFDIRNWQR HLNPLTWPEI FRQLALSAGF GPRLKKRSST RTYLGDNDEV KGCEDTISTL 660 RNGSAAENAF SLMRERGLLL PRRSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK 720 SGLRDLTTSK TPEASISVAL TRDQKLFERI APSTYCLRAA YRKDPADAEA ILSAARKKIR 780 IFENGFSGGE DVDDVERDED SEGDIDEDPE VDDLTTPLSA NRSADHSIEA NTCSGSGKDN 840 LCNGIPLIAQ NELVKEPSSI HLNGPKDAKT PSSTEQCVPH EDVGVRNVDQ ENIEIDESKS 900 GESWIQGLAE GEYAHLSVEE RLNSLVALVG IANEGNTIRA VLEDRLEAAN ALKKQMWAEA 960 QLDRSRLKED IVSKLDFPSF IGGKAEIQVT SSVVEGGQSP LPLDDSKNKE ASPSTAVDQK 1020 PLPASRNVQN HHNSVPTEKT LMVQDLSVNP DNFSSQQHGY ASKRSRSQLK AYIGHIAEET 1080 YVYRSLPLGQ DRRHNRYWQF VASASKNDPC SGRIFVELHD GNWRLIDSEE AFDALLSSLD 1140 TRGIRESHLR IMLQKIEKSF KQNVRRNFQS ENIVCQNGIA AENEVGEADS SPNCSAGIGS 1200 PSSMVCGSSS DALDTSSLFR IELGRNEMEQ KGAMKRYQDF QKWTWKECFN SLTLCAMKYG 1260 KKRCSQLLTT CDVCFDSYLA EDSDSVSCHQ TLNAADKSFN FLEHGIQCKV KRKLDPGVCD 1320 TSLPLGIRLL KALLAFIEAS VPPEARESFW IENHRKTWAT KLNMSSSTEE LLQILTVLES 1380 AIKRDYLSAN FEMTKELLGS ATSAQSALYG STDLGSVPVL PWIPKTTAAV ALRLFELDGS 1440 VAYIQHEKAE LSEDKPVKVY MKLPSRYSPL KNKEIELKGL RQHEHVKEEH LTDLRSKRSS 1500 YKRGRGGRDQ GYATKWQRRV PGLKSYSNRR NVRETGKFNL GSKQGRRTNA KSSGRGLRTV 1560 RRRRVEMMVA EEPLIGRMTS TVGPRSYGGS LRNLGEENWG AEKVRTDADV GMDVDVDVDV 1620 DVDLDDADNN SVEAGESDDN VEAEGYEQRN WEQSFNGASN RWNRTVMEVS DDDGDASGDD 1680 NGIEEMGAEE SEGDIEISEG SDGVGNKIEN EEGTDSAVSD FSSD

Sequence ? help Back to Top

Protein Sequence Length: 1724 aa Download sequence

MESNSEGENQ NRGSSANNNI GNSNEGHSRP KRQMKTPFQL EALEKAYALE AYPSEAMRAD  60
LSQKLGLSDR QLQMWFCHRR LKDKKETPAK KPRKAVPLES PVEEMRAMAP EPEPEPGSDY  120
GSGSGSGSSP FMEPRKVSLD DMPMIRRYYE SSPQSVMELR AIACVEAQLG EPLREDGPIL  180
GMEFDPLPPD AFGAPIAMAE QQKRPMHSYA GEVYERHDAK SSKVSARAFH EYQFLQDQSS  240
IRSDAYGQVD QSPYRDPSVD IPRGKASIIH EDEPLAKVQG VRHLSQPDKK GHALSSLHRD  300
DDYLLHHESV TNNRIDLRIG KKCKNDEARI TREVEARENQ IRKELEKQDQ LRRKSEERMR  360
KEMEKQERER RKEEDRLIRE RQREEERSLR EQKRELERRE KFLQKEYLRA EKKRQKEELR  420
REKEAVKRQA AIEKATARRI AKESLDLIED EQLELMELAA ASKGLTSVVH LNYDTLQNLD  480
SFRDSLSIFP PESIQLKKPF AIQPWMDSEE NIGNLLMVWK FFITFADVLG LWPFTLDEFV  540
QAFHDYDSRL LGEVHLALLK LIIKDIEDVA RTPSTGLGAN QYCAANPEGG HLQIVEGAYI  600
WGFDIRNWQR HLNPLTWPEI FRQLALSAGF GPRLKKRSST RTYLGDNDEV KGCEDTISTL  660
RNGSAAENAF SLMRERGLLL PRRSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK  720
SGLRDLTTSK TPEASISVAL TRDQKLFERI APSTYCLRAA YRKDPADAEA ILSAARKKIR  780
IFENGFSGGE DVDDVERDED SEGDIDEDPE VDDLTTPLSA NRSADHSIEA NTCSGSGKDN  840
LCNGIPLIAQ NELVKEPSSI HLNGPKDAKT PSSTEQCVPH EDVGVRNVDQ ENIEIDESKS  900
GESWIQGLAE GEYAHLSVEE RLNSLVALVG IANEGNTIRA VLEDRLEAAN ALKKQMWAEA  960
QLDRSRLKED IVSKLDFPSF IGGKAEIQVT SSVVEGGQSP LPLDDSKNKE ASPSTAVDQK  1020
PLPASRNVQN HHNSVPTEKT LMVQDLSVNP DNFSSQQHGY ASKRSRSQLK AYIGHIAEET  1080
YVYRSLPLGQ DRRHNRYWQF VASASKNDPC SGRIFVELHD GNWRLIDSEE AFDALLSSLD  1140
TRGIRESHLR IMLQKIEKSF KQNVRRNFQS ENIVCQNGIA AENEVGEADS SPNCSAGIGS  1200
PSSMVCGSSS DALDTSSLFR IELGRNEMEQ KGAMKRYQDF QKWTWKECFN SLTLCAMKYG  1260
KKRCSQLLTT CDVCFDSYLA EDSDSVSCHQ TLNAADKSFN FLEHGIQCKV KRKLDPGVCD  1320
TSLPLGIRLL KALLAFIEAS VPPEARESFW IENHRKTWAT KLNMSSSTEE LLQILTVLES  1380
AIKRDYLSAN FEMTKELLGS ATSAQSALYG STDLGSVPVL PWIPKTTAAV ALRLFELDGS  1440
VAYIQHEKAE LSEDKPVKVY MKLPSRYSPL KNKEIELKGL RQHEHVKEEH LTDLRSKRSS  1500
YKRGRGGRDQ GYATKWQRRV PGLKSYSNRR NVRETGKFNL GSKQGRRTNA KSSGRGLRTV  1560
RRRRVEMMVA EEPLIGRMTS TVGPRSYGGS LRNLGEENWG AEKVRTDADV GMDVDVDVDV  1620
DVDLDDADNN SVEAGESDDN VEAEGYEQRN WEQSFNGASN RWNRTVMEVS DDDGDASGDD  1680
NGIEEMGAEE SEGDIEISEG SDGVGNKIEN EEGTDSAVSD FSSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	86	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein