PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655707.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 450aa MW: 50681.4 Da PI: 6.8685

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.7	4.8e-36	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kve+k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_021655707.1 46 LPAGVKFDPTDQELI-EHLEAKVEAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 138 799**********.99*****5553344444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_021655707.1 139 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MSKSNLGSIS SSDLIDAKLE EHQLCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEAK DMKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWTDRTA TTGEGSSDPN SRRDSGSGSC 240 SSKEIIPQRD EITGAGVAAA LSTYCAMDIQ QLKSDHFGFP PFGKSFDEVV IGEASTAREA 300 PVSGTCDEIR EHHQRPHHMA HDHHQQQPQH HHVHHQIATT AFQISRPSHP ISAIISPPPL 360 HHASIILEED PYHVSRLMLQ NEIQHQHQQQ QQQQQHHKLG GRSTSGLEEL IMGCTSTDIK 420 EESSITNPQE AEWLKYSSFW PDSDSQDHHG

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MSKSNLGSIS SSDLIDAKLE EHQLCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVEAK DMKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN  180
WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWTDRTA TTGEGSSDPN SRRDSGSGSC  240
SSKEIIPQRD EITGAGVAAA LSTYCAMDIQ QLKSDHFGFP PFGKSFDEVV IGEASTAREA  300
PVSGTCDEIR EHHQRPHHMA HDHHQQQPQH HHVHHQIATT AFQISRPSHP ISAIISPPPL  360
HHASIILEED PYHVSRLMLQ NEIQHQHQQQ QQQQQHHKLG GRSTSGLEEL IMGCTSTDIK  420
EESSITNPQE AEWLKYSSFW PDSDSQDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-176	NAC family protein