PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021655192.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 243aa    MW: 26372.2 Da    PI: 6.2278
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021655192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260431.3e-1377126150
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalp 50 
                     +CaaCk+++r+C+++C +a y+p ++++kf +v  + Ga+n+ ++l++ +
  XP_021655192.1  77 PCAACKIHGRQCTDKCYVASYLPPTDSHKFTVVDGMVGAANIFSFLQNNN 126
                     7*********************************************9865 PP

2trihelix37.65.6e-12198234137
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskk 37 
                     rW++qe+laL+++r++m+ ++r+++ k+plWeevs++
  XP_021655192.1 198 RWPRQETLALLKIRSDMDMAFRDASVKGPLWEEVSSF 234
                     8**********************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGNNNHDFSP FLFPSTTPFV PFSGSSSFSS SYSVSPYSPS SPSLNSPSES YPSLPPHPAQ  60
SSSSSFNPSA DAGNLGPCAA CKIHGRQCTD KCYVASYLPP TDSHKFTVVD GMVGAANIFS  120
FLQNNNSSSY VPLLLLLRDA TTQDGELQAD INRHKHTSTQ QDPKILSAAS NGDPFFYDDG  180
DGITALKPLV RVSEGGNRWP RQETLALLKI RSDMDMAFRD ASVKGPLWEE VSSFNFCNRR  240
NLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-18Trihelix family protein