PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021655192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 243aa MW: 26372.2 Da PI: 6.2278 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 43 | 1.3e-13 | 77 | 126 | 1 | 50 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalp 50 +CaaCk+++r+C+++C +a y+p ++++kf +v + Ga+n+ ++l++ + XP_021655192.1 77 PCAACKIHGRQCTDKCYVASYLPPTDSHKFTVVDGMVGAANIFSFLQNNN 126 7*********************************************9865 PP | |||||||
2 | trihelix | 37.6 | 5.6e-12 | 198 | 234 | 1 | 37 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskk 37 rW++qe+laL+++r++m+ ++r+++ k+plWeevs++ XP_021655192.1 198 RWPRQETLALLKIRSDMDMAFRDASVKGPLWEEVSSF 234 8**********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGNNNHDFSP FLFPSTTPFV PFSGSSSFSS SYSVSPYSPS SPSLNSPSES YPSLPPHPAQ 60 SSSSSFNPSA DAGNLGPCAA CKIHGRQCTD KCYVASYLPP TDSHKFTVVD GMVGAANIFS 120 FLQNNNSSSY VPLLLLLRDA TTQDGELQAD INRHKHTSTQ QDPKILSAAS NGDPFFYDDG 180 DGITALKPLV RVSEGGNRWP RQETLALLKI RSDMDMAFRD ASVKGPLWEE VSSFNFCNRR 240 NLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 1e-18 | Trihelix family protein |