PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021655140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GRF | ||||||||
Protein Properties | Length: 402aa MW: 43574.6 Da PI: 8.5901 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 80.5 | 1.5e-25 | 148 | 191 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_021655140.1 148 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 191 79***************************************987 PP | |||||||
2 | QLQ | 49.7 | 1.1e-17 | 80 | 116 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ Q+q+L+ Q+l+y+y++a++ vPpeLlq i+k XP_021655140.1 80 SYFSLVQWQELELQALIYRYMLAGAAVPPELLQSIKK 116 78********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MDFHLKPWRT EQLESEEQHS AKMPKLLMDS HQPQLHYSSG STAPLPLFVP ESNSKISNLS 60 AFPDSTPAAA TTRFPRMGGS YFSLVQWQEL ELQALIYRYM LAGAAVPPEL LQSIKKSLLH 120 SPPYFLHHPL QQYSYYQPAW YWGRAAMDPE PGRCRRTDGK KWRCSRDVVA GQKYCERHVH 180 RGRNRSRKPV EIPTPTSSST ATTSVGIGGE GAGAAAAAAF NSTASIVAPP LAAVPIGASF 240 SFSGQSPSTD LLHLSNGSMD SKPEIKGLFG PQNEFANRRD GHILRHFFDD WPRSLQQPDT 300 AGSNASPMNS ATCLSISMSG NSSSDVSLKL STGNGEESAG NGRNEREHPQ VNWTGGWGTT 360 QVASMGGPLA EALRSSTSNS SPTSVLHQLP RGSASETSYV ST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52910.1 | 2e-95 | GRF family protein |