PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021653963.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 159aa    MW: 17645 Da    PI: 8.7057
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021653963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.91.3e-116384526
                    --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                     C++f +tG+C+yGd+Ck+ H+
  XP_021653963.1 63 VCNRFVKTGFCPYGDSCKYLHP 84
                    5********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MPLGKYYCDY CDKEFQDTPV ARKRHLQSSS HLRAKSLWYN SLKSQDLNQA YIDGGGGAFT  60
KGVCNRFVKT GFCPYGDSCK YLHPTNSNNL QNNVNLFQAT RLMNNVHSPI ILGNQLVGGS  120
SLPADVVRDS MGMPWGNLPP SLKPPPEGGY LPFPFVDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.11e-51C3H family protein