PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653885.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 681aa MW: 76431.3 Da PI: 5.2429

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	4.1e-14	472	518	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_021653885.1 472 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 518 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MAAPPSSRLQ GMLQAAVQSV QWTYSLFWQF CPQQGILVWG DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TESEWFYLMC VSFSFPPGVG 120 LPGKAYARRQ HVWLTGANEI DSKTFSRAIL AKTVVCIPLL DGVVELGTTE KVQEDLGFVQ 180 QVKGFFIDHH HPPLPPPPKQ ALSEHSTSNP ATSSDQPHFH PPIPSIYGAT DPRTNDKQDE 240 DDEEEEEEED DEEEEDGSDS EAETGRNTRS VATQAQNAET VTTAEPSELM QLEMSEDIRL 300 GSPDDGSNNL ESDFHLIGSE NPADHQNRGD SFRAESARRW AMVQDPLSSS LQAAPSAGPP 360 PHQGMPQEDT HYSQTVSAIL QSQRIRWAES SSSAYLSYSN QSAFTKWTNR CSDHVLHFSV 420 EGTSQWFLKY ILFSVPYLHH KYREENSPKS RDGDSANRFR KGGAPQDELS ANHVLAERRR 480 REKLNERFII LRSLVPFVTK MDKASILGDT IEYVKQLRKK IQELEARNRH MEIEQRSRLA 540 EPPRRTSSLK EQRSTVTVTD RARNGPGSDK RKLRIVEVSG GCAKPKTVET SELMEAETNV 600 EVSIIECDAL LEIQCGYREG LLLDIMQMLR ELRIETTAVQ SSLNNGVFVA ELRAKVKDNV 660 AGKKVSIVEV KRAIRQIIPH D

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MAAPPSSRLQ GMLQAAVQSV QWTYSLFWQF CPQQGILVWG DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TESEWFYLMC VSFSFPPGVG  120
LPGKAYARRQ HVWLTGANEI DSKTFSRAIL AKTVVCIPLL DGVVELGTTE KVQEDLGFVQ  180
QVKGFFIDHH HPPLPPPPKQ ALSEHSTSNP ATSSDQPHFH PPIPSIYGAT DPRTNDKQDE  240
DDEEEEEEED DEEEEDGSDS EAETGRNTRS VATQAQNAET VTTAEPSELM QLEMSEDIRL  300
GSPDDGSNNL ESDFHLIGSE NPADHQNRGD SFRAESARRW AMVQDPLSSS LQAAPSAGPP  360
PHQGMPQEDT HYSQTVSAIL QSQRIRWAES SSSAYLSYSN QSAFTKWTNR CSDHVLHFSV  420
EGTSQWFLKY ILFSVPYLHH KYREENSPKS RDGDSANRFR KGGAPQDELS ANHVLAERRR  480
REKLNERFII LRSLVPFVTK MDKASILGDT IEYVKQLRKK IQELEARNRH MEIEQRSRLA  540
EPPRRTSSLK EQRSTVTVTD RARNGPGSDK RKLRIVEVSG GCAKPKTVET SELMEAETNV  600
EVSIIECDAL LEIQCGYREG LLLDIMQMLR ELRIETTAVQ SSLNNGVFVA ELRAKVKDNV  660
AGKKVSIVEV KRAIRQIIPH D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	477	482	ERRRRE
2	478	483	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-101	bHLH family protein