PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653884.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 686aa MW: 76986.9 Da PI: 5.3132

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.1e-14	477	523	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_021653884.1 477 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 523 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MAAPPSSRLQ GMLQAAVQSV QWTYSLFWQF CPQQGILVWG DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TESEWFYLMC VSFSFPPGVG 120 LPGKAYARRQ HVWLTGANEI DSKTFSRAIL AKSARIQTVV CIPLLDGVVE LGTTEKVQED 180 LGFVQQVKGF FIDHHHPPLP PPPKQALSEH STSNPATSSD QPHFHPPIPS IYGATDPRTN 240 DKQDEDDEEE EEEEDDEEEE DGSDSEAETG RNTRSVATQA QNAETVTTAE PSELMQLEMS 300 EDIRLGSPDD GSNNLESDFH LIGSENPADH QNRGDSFRAE SARRWAMVQD PLSSSLQAAP 360 SAGPPPHQGM PQEDTHYSQT VSAILQSQRI RWAESSSSAY LSYSNQSAFT KWTNRCSDHV 420 LHFSVEGTSQ WFLKYILFSV PYLHHKYREE NSPKSRDGDS ANRFRKGGAP QDELSANHVL 480 AERRRREKLN ERFIILRSLV PFVTKMDKAS ILGDTIEYVK QLRKKIQELE ARNRHMEIEQ 540 RSRLAEPPRR TSSLKEQRST VTVTDRARNG PGSDKRKLRI VEVSGGCAKP KTVETSELME 600 AETNVEVSII ECDALLEIQC GYREGLLLDI MQMLRELRIE TTAVQSSLNN GVFVAELRAK 660 VKDNVAGKKV SIVEVKRAIR QIIPHD

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MAAPPSSRLQ GMLQAAVQSV QWTYSLFWQF CPQQGILVWG DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TESEWFYLMC VSFSFPPGVG  120
LPGKAYARRQ HVWLTGANEI DSKTFSRAIL AKSARIQTVV CIPLLDGVVE LGTTEKVQED  180
LGFVQQVKGF FIDHHHPPLP PPPKQALSEH STSNPATSSD QPHFHPPIPS IYGATDPRTN  240
DKQDEDDEEE EEEEDDEEEE DGSDSEAETG RNTRSVATQA QNAETVTTAE PSELMQLEMS  300
EDIRLGSPDD GSNNLESDFH LIGSENPADH QNRGDSFRAE SARRWAMVQD PLSSSLQAAP  360
SAGPPPHQGM PQEDTHYSQT VSAILQSQRI RWAESSSSAY LSYSNQSAFT KWTNRCSDHV  420
LHFSVEGTSQ WFLKYILFSV PYLHHKYREE NSPKSRDGDS ANRFRKGGAP QDELSANHVL  480
AERRRREKLN ERFIILRSLV PFVTKMDKAS ILGDTIEYVK QLRKKIQELE ARNRHMEIEQ  540
RSRLAEPPRR TSSLKEQRST VTVTDRARNG PGSDKRKLRI VEVSGGCAKP KTVETSELME  600
AETNVEVSII ECDALLEIQC GYREGLLLDI MQMLRELRIE TTAVQSSLNN GVFVAELRAK  660
VKDNVAGKKV SIVEVKRAIR QIIPHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	487	ERRRRE
2	483	488	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-106	bHLH family protein