PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021653744.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 171aa MW: 19017.7 Da PI: 8.7752 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.4 | 2.5e-08 | 82 | 96 | 11 | 26 |
GTS--TTTTT-SS-SS CS zf-CCCH 11 rtGtCkyGdrCkFaHg 26 + G+C+yGd+Ck+ H+ XP_021653744.1 82 K-GFCPYGDSCKYLHP 96 4.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MPLGKYYCDY CDKEFQDTPV ARKRHLQSSS HLRAKSLWYN SLKSQDLNQA YIDGGGGAFT 60 KGVCNRFVKT FSICAFLSYV LKGFCPYGDS CKYLHPTNSN NLQNNVNLFQ ATRLMNNVHS 120 PIILGNQLVG GSSLPADVVR DSMGMPWGNL PPSLKPPPEG GYLPFPFVDW G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26749.1 | 4e-48 | C3H family protein |