PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653544.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 529aa MW: 57457.4 Da PI: 5.163

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	345	387	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N+++ Lr+++Pk + K++ a+iL A++Y+k+L XP_021653544.1 345 MAERRRRKRLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 387 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MVLGANVWID GVGVAAAAAA VEEEEEDAVS SWTRHHNNDN EVQPKEEDLG INASLSTFKS 60 MLDTDWYDIN PSPHHDLHAL QNHHEIRDLG FCANPTPENL LLQPMDSSSS CSPSQAFTLD 120 PAQAHQPFFP PKSCFSSLLN VTNAFDNGFD LGCENAFLGQ YQPNQASNLM GFSGPEFQAS 180 QLLPVSDNAA AIGGAGFSNV GLEGFDGSTG NALFLSRAKV LRPLEVLPPV GSPPTLFQKR 240 AMLRQSGDKL GNLEISGLRY GGEIGGNWGE MERKRKKSEE GEIEEASFDV SGLNYDSDEH 300 NGDGKIEESV KNNGGSNSNA NSTVTGGGGG DQKGKKKGMP AKNLMAERRR RKRLNDRLYM 360 LRSVVPKISK MDRASILGDA IDYLKELLQR INDLHNELES TPPGPLLPQS TSIHPVTPTP 420 PAIPSRVKEE LCPSSLSSPK NQATRVEVRV REGRAVNIHM FCARRPGLLL STMRALDNLG 480 LDIQQAVISC FNGFALDVFR AEQCREGQDV LPEQIKAVLL DSAGFHGMM

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MVLGANVWID GVGVAAAAAA VEEEEEDAVS SWTRHHNNDN EVQPKEEDLG INASLSTFKS  60
MLDTDWYDIN PSPHHDLHAL QNHHEIRDLG FCANPTPENL LLQPMDSSSS CSPSQAFTLD  120
PAQAHQPFFP PKSCFSSLLN VTNAFDNGFD LGCENAFLGQ YQPNQASNLM GFSGPEFQAS  180
QLLPVSDNAA AIGGAGFSNV GLEGFDGSTG NALFLSRAKV LRPLEVLPPV GSPPTLFQKR  240
AMLRQSGDKL GNLEISGLRY GGEIGGNWGE MERKRKKSEE GEIEEASFDV SGLNYDSDEH  300
NGDGKIEESV KNNGGSNSNA NSTVTGGGGG DQKGKKKGMP AKNLMAERRR RKRLNDRLYM  360
LRSVVPKISK MDRASILGDA IDYLKELLQR INDLHNELES TPPGPLLPQS TSIHPVTPTP  420
PAIPSRVKEE LCPSSLSSPK NQATRVEVRV REGRAVNIHM FCARRPGLLL STMRALDNLG  480
LDIQQAVISC FNGFALDVFR AEQCREGQDV LPEQIKAVLL DSAGFHGMM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	277	RKRKK
2	335	353	KKKGMPAKNLMAERRRRKR
3	347	354	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-144	bHLH family protein