PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653460.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 531aa MW: 56962 Da PI: 6.1416

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.1	1.5e-23	185	227	2	44
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e XP_021653460.1 185 LEPGRCRRTDGKKWRCSRDVARDQKYCERHMHRGRPRSRKPVE 227 69**************************************987 PP
2	QLQ	56.4	9.1e-20	123	155	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT+aQ+ +L++Q ++yKy++a++PvPp+Ll++ XP_021653460.1 123 PFTNAQWKELERQTMIYKYMMASVPVPPHLLFP 155 8*****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MTIDSFSVFD KAESSSSSDC VDLCVKLQHT EPLPFRTMVV DQYDHYRPFP SYGLGGGDGP 60 TRYNNRCISN DIYDVVVAGG GGAAANGGAA DGLRTLQPFD ISPAETITAF KSPGGIAATM 120 GFPFTNAQWK ELERQTMIYK YMMASVPVPP HLLFPTPRNL NSDPVARHSS LGTGLNLKFT 180 NGADLEPGRC RRTDGKKWRC SRDVARDQKY CERHMHRGRP RSRKPVELQA NTDTNNNNKK 240 TRYNPAVSAE SPVPAVASQF VGTNSQPYLQ APVFPDKPSE KVANFDASLA FAAAFKEEPR 300 SLEWMIKGEP ADQQWHHMIK QTEIGLSNER SFNSTPILNP DYHGGEALNL NSFGNFSAGE 360 DHHSNQCTLF LNETPRGFID AWSNGASDDQ SGAASRNTGS AVSSNGKLSQ SSLSLSMGGI 420 NMDDEMDQIQ MGLGLIESDQ NRECCTKSLA MSSASWTGAT PGGPLAEVIQ LSSANATASQ 480 SSPVAENGDS GSPPATAVSS PSGFPQKTLA SFSDSSSNSS PTLASTARAK S

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MTIDSFSVFD KAESSSSSDC VDLCVKLQHT EPLPFRTMVV DQYDHYRPFP SYGLGGGDGP  60
TRYNNRCISN DIYDVVVAGG GGAAANGGAA DGLRTLQPFD ISPAETITAF KSPGGIAATM  120
GFPFTNAQWK ELERQTMIYK YMMASVPVPP HLLFPTPRNL NSDPVARHSS LGTGLNLKFT  180
NGADLEPGRC RRTDGKKWRC SRDVARDQKY CERHMHRGRP RSRKPVELQA NTDTNNNNKK  240
TRYNPAVSAE SPVPAVASQF VGTNSQPYLQ APVFPDKPSE KVANFDASLA FAAAFKEEPR  300
SLEWMIKGEP ADQQWHHMIK QTEIGLSNER SFNSTPILNP DYHGGEALNL NSFGNFSAGE  360
DHHSNQCTLF LNETPRGFID AWSNGASDDQ SGAASRNTGS AVSSNGKLSQ SSLSLSMGGI  420
NMDDEMDQIQ MGLGLIESDQ NRECCTKSLA MSSASWTGAT PGGPLAEVIQ LSSANATASQ  480
SSPVAENGDS GSPPATAVSS PSGFPQKTLA SFSDSSSNSS PTLASTARAK S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	2e-35	GRF family protein