PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653384.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SRS

Protein Properties

Length: 356aa MW: 36981.6 Da PI: 8.1908

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	219.9	5.3e-68	136	295	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 sg+++CqdCGnqakkdC+h+RCRtCCksrg+dC+thvkstWvpaa+rrerq ++aaa a +s +++ k++r +++++++s+t++s+++++ XP_021653384.1 136 SGATTCQDCGNQAKKDCSHRRCRTCCKSRGYDCTTHVKSTWVPAARRRERQLMAAAAGGGAGSSGSTSGVKKPRLI-NSQTTTTSHTSTSNTTPP 229 6889*********************************************9999999999999999999999986.788899999***** PP DUF702 98 keletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++++tss lP +v+++avf+cvrv++v+dge+e+aYq++v+igGhvfkG+LydqG+e XP_021653384.1 230 RSFDTSSshqdasfkeaLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVE 295 *999******************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGMFVVAPAA SFNHHHHHQH QHQHEPSINL ADPMNGPNAA ATALGVGMGV GVIPLLTAAP 60 CLAPQNMDDQ DLFNNGRNKI SGIQFWQNQT SHHHSQYNIK KTAASILDHN NSSVNLLQSV 120 NNTSAGGGLG GNSASSGATT CQDCGNQAKK DCSHRRCRTC CKSRGYDCTT HVKSTWVPAA 180 RRRERQLMAA AAGGGAGSSG STSGVKKPRL INSQTTTTSH TSTSNTTPPR SFDTSSSHQD 240 ASFKEALPGQ VRAPAVFKCV RVTAVEDGED EYAYQAVVKI GGHVFKGFLY DQGVEGRDGF 300 PNISELHLGG ASSSGGGDGG GRNGASSSSP IIDPSDVYGA SGGGLLGGSS YGNPIN

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGMFVVAPAA SFNHHHHHQH QHQHEPSINL ADPMNGPNAA ATALGVGMGV GVIPLLTAAP  60
CLAPQNMDDQ DLFNNGRNKI SGIQFWQNQT SHHHSQYNIK KTAASILDHN NSSVNLLQSV  120
NNTSAGGGLG GNSASSGATT CQDCGNQAKK DCSHRRCRTC CKSRGYDCTT HVKSTWVPAA  180
RRRERQLMAA AAGGGAGSSG STSGVKKPRL INSQTTTTSH TSTSNTTPPR SFDTSSSHQD  240
ASFKEALPGQ VRAPAVFKCV RVTAVEDGED EYAYQAVVKI GGHVFKGFLY DQGVEGRDGF  300
PNISELHLGG ASSSGGGDGG GRNGASSSSP IIDPSDVYGA SGGGLLGGSS YGNPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	2e-73	SRS family protein