PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021652948.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | bHLH | ||||||||
Protein Properties | Length: 447aa MW: 49157.2 Da PI: 7.0724 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.7 | 6.4e-06 | 337 | 375 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_021652948.1 337 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 375 5778999**********998.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence |
MADEFNTSTN WWDSSRNRFD SGSSSSSSGL NSLGSFAWPS EVVNVKGRPS IESASVSGSS 60 AVFHDTQKLQ QGQDSSADLH MMGLGLSSQA MDWNPALLRS DKAESGIRSM LQENLNSSAS 120 YQHETGIGSS QVQWRERMFS GVSSHSSMNE FKQMNRGVLD QPQFSPHGSS SDSTVTCQGL 180 QSSNFQMDST AIYGSPSTML QGLLGSDNQP QQQCSFENRS MSYPYGANYG ITTNELVPSW 240 SNKVPPFLRN SPPKQLSQLH FSNNAPFWNA SASSMNDVRP SFFPSLQPQF PASNFEEKPK 300 NISEVRDSST TVKKSGSEQA TKRPRNETPS PMPAFKVRKE KMGDRITALQ QLVSPFGKTD 360 TASVLSEAIE YIKFLHEQVT VLSTPYLKSG APIHHQQSSD KSNKDSEGQK QDLRSRGLCL 420 VPVSSTFPVT HETTVDFWTP TFGGTFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20640.1 | 4e-87 | bHLH family protein |