PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652821.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 296aa MW: 34023.2 Da PI: 8.0518

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.2	6.6e-16	25	116	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W+++ + +L+e+ ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ ++k+yk +k++ + + +s++p+f++l+a XP_021652821.1 25 CWSEEATSTLVEVWGKRYLELNRGNLRQKDWQEVADAVnakhgHTKKTHRTDVQCKNRIDTIKKKYKIEKARVTSSNGMLTSSWPFFESLDA 116 7************************************999999999*********************999888889*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MGDLTDSVTP STTPHSRPLP IREDCWSEEA TSTLVEVWGK RYLELNRGNL RQKDWQEVAD 60 AVNAKHGHTK KTHRTDVQCK NRIDTIKKKY KIEKARVTSS NGMLTSSWPF FESLDALIGS 120 NFTAKKQASP SLSPSPPVAM PLTSYRRTPT STPSTAVVSL PQKRPLDDGY FRRNYSAMAA 180 AAAAESESEE EDEEEERERE RERERERESE EDEEGEGIKR LARAIERFGE VYERVESEKL 240 RQMLDLEKQR MKFAKDLEME RMRIFTETQI QLEKIKKGKR SGSNGIIRKA CINYVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	207	RERERERERER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	4e-45	Trihelix family protein