PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652796.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 151aa    MW: 17765.8 Da    PI: 9.656
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF404.9e-13539842
                    HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  8 nrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    +r+ tf kRr+g+lKK  EL +LC++ ++ iifs 
  XP_021652796.1  5 RRKLTFKKRRAGLLKKLMELTTLCGVIACAIIFSA 39
                    899******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MHCWRRKLTF KKRRAGLLKK LMELTTLCGV IACAIIFSAY NSSPDIWPSH PEAVSVLEKF  60
KRLPPKKQSK YMMDQESFLT RNISKLNEKL EKQRKKNERI ELELIYAKCI TGENLDPLNS  120
FMNMNDISHL LKENLEYMTD RIDAAKDKIE E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22590.23e-29M-type_MADS family protein