PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652755.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 759aa MW: 84263.1 Da PI: 5.6507

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.2	2.2e-21	107	162	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k XP_021652755.1 107 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 162 7999************************************************9877 PP
2	START	223.6	6e-70	275	498	2	206
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 + ++a++el+k+a+a+ep+W +s+ e++n+de++++f ++ +s+ea+r++gv + +l++lv+++ d + qW+e+++ ka+t+ XP_021652755.1 275 IVNQAMEELMKMATAGEPLWIRSVetgrEILNYDEYMKEFGVENPssgrpkRSIEASRETGVAFVDLPRLVQIFNDAN-QWKEMFPclisKAATV 368 56789*********************************66655999************************99.************ PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 +vis+g ga+qlm+ae q+l+p+vp R+ +fvRy++ql+a++w+ivdvS+d +++ ++s+v+++++pSg++ie+ksngh+kvtwveh XP_021652755.1 369 DVISNGegpnknGAVQLMFAEVQMLTPMVPtREIYFVRYCKQLSAEKWAIVDVSIDKVEDNI-DASLVKCRKRPSGCIIEDKSNGHCKVTWVEHL 462 ********************************************************98.9*************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 +++++ +h+++r +v+sgla+ga++w+atlq qce+ XP_021652755.1 463 ECQKSPVHSMYRTIVNSGLAFGARHWTATLQLQCER 498 ********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MGVVDMSNPP TSRTKDFFAS PALSLSLAGI FRSANADGAA EASEMEVEEG EEGSGGERGR 60 REGTVEISSE NSGPMRSRSD DEFEGEGEHD DDDDAVAGDD KNKKKKRKKY HRHTAEQIRE 120 MEALFKESPH PDEKQRQQLS KQLGLAPRQV KFWFQNRRTQ IKAIQERHEN SLLKTEMEKL 180 REENKAMRET INKACCPNCG MATTSRDSSL TTEEQQLRIE NAKLKAEVEK LRAALGNSPS 240 GAAPSCSAGN EQENRSSLDF YTGIFGLEKS RIMEIVNQAM EELMKMATAG EPLWIRSVET 300 GREILNYDEY MKEFGVENPS SGRPKRSIEA SRETGVAFVD LPRLVQIFND ANQWKEMFPC 360 LISKAATVDV ISNGEGPNKN GAVQLMFAEV QMLTPMVPTR EIYFVRYCKQ LSAEKWAIVD 420 VSIDKVEDNI DASLVKCRKR PSGCIIEDKS NGHCKVTWVE HLECQKSPVH SMYRTIVNSG 480 LAFGARHWTA TLQLQCERIV FYMATNVPTK DSTGVTTLAG RKSILKLAHR MTWSFCRAIG 540 ASSYHTWNKV TSKTGDDIRF SSRKNLNDPS EPIGVILCVV SSAWLPVSPP VLFDFLRDET 600 HRNEWDIISN GSPVQSIANL AKGQDRGNAV TIQTMKSKEN PMWVLQDCCT NAYESLVVYA 660 PVDINGMQSV ITGCDSSNVA VLPSGFSILP DGLESRPLVI TSRQEEKGTE GGSLLTMAVQ 720 IITSTSPTAK LTTESVESVN TLISCTLQNI RTSLQCEDS

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MGVVDMSNPP TSRTKDFFAS PALSLSLAGI FRSANADGAA EASEMEVEEG EEGSGGERGR  60
REGTVEISSE NSGPMRSRSD DEFEGEGEHD DDDDAVAGDD KNKKKKRKKY HRHTAEQIRE  120
MEALFKESPH PDEKQRQQLS KQLGLAPRQV KFWFQNRRTQ IKAIQERHEN SLLKTEMEKL  180
REENKAMRET INKACCPNCG MATTSRDSSL TTEEQQLRIE NAKLKAEVEK LRAALGNSPS  240
GAAPSCSAGN EQENRSSLDF YTGIFGLEKS RIMEIVNQAM EELMKMATAG EPLWIRSVET  300
GREILNYDEY MKEFGVENPS SGRPKRSIEA SRETGVAFVD LPRLVQIFND ANQWKEMFPC  360
LISKAATVDV ISNGEGPNKN GAVQLMFAEV QMLTPMVPTR EIYFVRYCKQ LSAEKWAIVD  420
VSIDKVEDNI DASLVKCRKR PSGCIIEDKS NGHCKVTWVE HLECQKSPVH SMYRTIVNSG  480
LAFGARHWTA TLQLQCERIV FYMATNVPTK DSTGVTTLAG RKSILKLAHR MTWSFCRAIG  540
ASSYHTWNKV TSKTGDDIRF SSRKNLNDPS EPIGVILCVV SSAWLPVSPP VLFDFLRDET  600
HRNEWDIISN GSPVQSIANL AKGQDRGNAV TIQTMKSKEN PMWVLQDCCT NAYESLVVYA  660
PVDINGMQSV ITGCDSSNVA VLPSGFSILP DGLESRPLVI TSRQEEKGTE GGSLLTMAVQ  720
IITSTSPTAK LTTESVESVN TLISCTLQNI RTSLQCEDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	108	KKKKRK
2	103	109	KKKKRKK
3	105	109	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79840.1	0.0	HD-ZIP family protein