PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652589.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 494aa MW: 53707.6 Da PI: 5.8338

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94	1.1e-29	108	165	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dgy+WrKYGqK vkg+ef rsYY+Ct+++C+vkk++ers+ d++v +i Y g+H+h+k XP_021652589.1 108 EDGYHWRKYGQKLVKGNEFIRSYYKCTHPSCQVKKQLERSR-DGQVADINYFGQHDHPK 165 8**************************************.*************85 PP
2	WRKY	106	1.9e-33	276	334	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+s+gCpvkk+ver+++dpkvv++ Yeg+H+h+ XP_021652589.1 276 VNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVITSYEGQHDHD 334 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MVSSREGTDE FASDELQKGQ SPDDGSHMIQ QIDDSGIHIS QNDEVTPVTT EKSLLDTNPG 60 AHISQLNKEG SVSSVILHKV LLTPGTGSSA LQSGQEGRTS IVREKALEDG YHWRKYGQKL 120 VKGNEFIRSY YKCTHPSCQV KKQLERSRDG QVADINYFGQ HDHPKPEHNL PPAAGLMLSV 180 VEERGDEPSS TGTEEDHAPH LLKSTSTSQI LVGTTSEDVK GALSESNKIR DEVDNDDDLR 240 PKRQKKGNRN VEPAVADKPT NEQRHVVQTL SEVDIVNDGY RWRKYGQKLV KGNPNPRSYY 300 RCSSPGCPVK KHVERASHDP KVVITSYEGQ HDHDMPPSRT VTHNATGLST YTTNIHIGES 360 GVKSGGSDGI VHKSLDPSGN SEEQLNSELT CKSEGNDVSG SDMVIHSGSG DDNGKSNEPQ 420 NGKSSAIEGS DAAVVDTVVN ASSVSGCRSI EQHDRESRNE SKVNYAAYSG HTIAPGPETN 480 PNEQHMPNAE PVQS

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MVSSREGTDE FASDELQKGQ SPDDGSHMIQ QIDDSGIHIS QNDEVTPVTT EKSLLDTNPG  60
AHISQLNKEG SVSSVILHKV LLTPGTGSSA LQSGQEGRTS IVREKALEDG YHWRKYGQKL  120
VKGNEFIRSY YKCTHPSCQV KKQLERSRDG QVADINYFGQ HDHPKPEHNL PPAAGLMLSV  180
VEERGDEPSS TGTEEDHAPH LLKSTSTSQI LVGTTSEDVK GALSESNKIR DEVDNDDDLR  240
PKRQKKGNRN VEPAVADKPT NEQRHVVQTL SEVDIVNDGY RWRKYGQKLV KGNPNPRSYY  300
RCSSPGCPVK KHVERASHDP KVVITSYEGQ HDHDMPPSRT VTHNATGLST YTTNIHIGES  360
GVKSGGSDGI VHKSLDPSGN SEEQLNSELT CKSEGNDVSG SDMVIHSGSG DDNGKSNEPQ  420
NGKSSAIEGS DAAVVDTVVN ASSVSGCRSI EQHDRESRNE SKVNYAAYSG HTIAPGPETN  480
PNEQHMPNAE PVQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	2e-95	WRKY family protein