PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021652584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GRAS | ||||||||
Protein Properties | Length: 543aa MW: 60607.7 Da PI: 5.954 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 450.5 | 1.1e-137 | 175 | 543 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +L+ cA+avs++dl +aq+l+ +l+ ++s +g+p+qRl ay++e+L arl +s+s++ykal+++e + s+e l+++++++ev+P++kf+++ XP_021652584.1 175 YVLVVCAQAVSDNDLLKAQWLMDELRPMVSVSGEPIQRLGAYMLEGLVARLPSSGSSIYKALRCREPA---SAEMLSYMHILYEVCPYFKFGYMS 266 5799***************************************************************9...9*********************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190 aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg+++++s + l+ +g+rL+++A+ ++vpfef++ +a + +++ XP_021652584.1 267 ANGAIAEAMKDENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPHIRITGIDDSTSAyaRGGGLNIVGKRLSRLAQIVKVPFEFHA-AAMSGCEVQ 360 ****************************************************998899999************************.89999**** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285 +e+L v pgEalaVn+++ lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rfle+l+yy+a+f+s++++lpr+ +eri+v XP_021652584.1 361 VEDLGVLPGEALAVNFAFVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYTAMFESIDVTLPRDLKERINV 455 *********************************************************************************************** PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 E+++l+r++vn++aceg+er+erhe l+kWr+r+++aGF+p+pls+ +++++k+ll+ + + yr+ee++g+l+lgW++r Lv+ +aW+ XP_021652584.1 456 EQHCLARDVVNIIACEGTERVERHELLGKWRSRFRMAGFTPYPLSSLVNSTIKTLLESYCD-KYRLEERDGALYLGWMNRDLVASCAWK 543 ***********************************************************95.5*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MQASQLRSRG MSTRLYYQPM QEVDAYCMPQ LQSLDHQLCY SGSSQGSNLF ILNSREQYCT 60 LKSSSANGSY TVYNSPSTIS FSPNGSPVSQ QESQSYPPDT RHSPDNNYGS PVSGSCITDT 120 VHDYQNKLSE LENAMFGPDS DIIDSTFLNG TTIKSPEMDS LRQIVEAISR GDLKYVLVVC 180 AQAVSDNDLL KAQWLMDELR PMVSVSGEPI QRLGAYMLEG LVARLPSSGS SIYKALRCRE 240 PASAEMLSYM HILYEVCPYF KFGYMSANGA IAEAMKDENR VHIIDFQIGQ GSQWVTLIQA 300 FAARPGGPPH IRITGIDDST SAYARGGGLN IVGKRLSRLA QIVKVPFEFH AAAMSGCEVQ 360 VEDLGVLPGE ALAVNFAFVL HHMPDESVST QNHRDRLLRL VKSLSPKVVT LVEQESNTNT 420 AAFFPRFLET LNYYTAMFES IDVTLPRDLK ERINVEQHCL ARDVVNIIAC EGTERVERHE 480 LLGKWRSRFR MAGFTPYPLS SLVNSTIKTL LESYCDKYRL EERDGALYLG WMNRDLVASC 540 AWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |