PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652583.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 543aa    MW: 60607.7 Da    PI: 5.954
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652583.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.51.1e-1371755433374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                      +L+ cA+avs++dl +aq+l+ +l+ ++s +g+p+qRl ay++e+L arl +s+s++ykal+++e +   s+e l+++++++ev+P++kf+++ 
  XP_021652583.1 175 YVLVVCAQAVSDNDLLKAQWLMDELRPMVSVSGEPIQRLGAYMLEGLVARLPSSGSSIYKALRCREPA---SAEMLSYMHILYEVCPYFKFGYMS 266
                     5799***************************************************************9...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg+++++s   +   l+ +g+rL+++A+ ++vpfef++ +a +  +++
  XP_021652583.1 267 ANGAIAEAMKDENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPHIRITGIDDSTSAyaRGGGLNIVGKRLSRLAQIVKVPFEFHA-AAMSGCEVQ 360
                     ****************************************************998899999************************.89999**** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+L v pgEalaVn+++ lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rfle+l+yy+a+f+s++++lpr+ +eri+v
  XP_021652583.1 361 VEDLGVLPGEALAVNFAFVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYTAMFESIDVTLPRDLKERINV 455
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+++l+r++vn++aceg+er+erhe l+kWr+r+++aGF+p+pls+ +++++k+ll+ + +  yr+ee++g+l+lgW++r Lv+ +aW+
  XP_021652583.1 456 EQHCLARDVVNIIACEGTERVERHELLGKWRSRFRMAGFTPYPLSSLVNSTIKTLLESYCD-KYRLEERDGALYLGWMNRDLVASCAWK 543
                     ***********************************************************95.5*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MQASQLRSRG MSTRLYYQPM QEVDAYCMPQ LQSLDHQLCY SGSSQGSNLF ILNSREQYCT  60
LKSSSANGSY TVYNSPSTIS FSPNGSPVSQ QESQSYPPDT RHSPDNNYGS PVSGSCITDT  120
VHDYQNKLSE LENAMFGPDS DIIDSTFLNG TTIKSPEMDS LRQIVEAISR GDLKYVLVVC  180
AQAVSDNDLL KAQWLMDELR PMVSVSGEPI QRLGAYMLEG LVARLPSSGS SIYKALRCRE  240
PASAEMLSYM HILYEVCPYF KFGYMSANGA IAEAMKDENR VHIIDFQIGQ GSQWVTLIQA  300
FAARPGGPPH IRITGIDDST SAYARGGGLN IVGKRLSRLA QIVKVPFEFH AAAMSGCEVQ  360
VEDLGVLPGE ALAVNFAFVL HHMPDESVST QNHRDRLLRL VKSLSPKVVT LVEQESNTNT  420
AAFFPRFLET LNYYTAMFES IDVTLPRDLK ERINVEQHCL ARDVVNIIAC EGTERVERHE  480
LLGKWRSRFR MAGFTPYPLS SLVNSTIKTL LESYCDKYRL EERDGALYLG WMNRDLVASC  540
AWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein