PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021652563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 116aa MW: 13029.2 Da PI: 8.3203 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 122.7 | 2e-38 | 5 | 104 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C+aCk+lrrkC+ dC+++pyfp+++p++f +vhk++G snv k+l++lp + r +a+++l+yeA++r++dPvyG+vg+i+ l qq+++++++la XP_021652563.1 5 RCSACKYLRRKCPLDCIFSPYFPSNDPERFSCVHKIYGSSNVGKMLQQLPVHLRAAAADCLCYEARCRIQDPVYGCVGIISLLYQQIHSAENQLA 99 6********************************************************************************************** PP DUF260 96 llkee 100 ++k+e XP_021652563.1 100 ETKAE 104 99987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 116 aa Download sequence |
MINGRCSACK YLRRKCPLDC IFSPYFPSND PERFSCVHKI YGSSNVGKML QQLPVHLRAA 60 AADCLCYEAR CRIQDPVYGC VGIISLLYQQ IHSAENQLAE TKAEIAVLAV NKNFQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26660.1 | 4e-54 | LBD family protein |