PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652562.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 347aa MW: 37005 Da PI: 9.0286

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652562.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	139.1	1.3e-43	44	119	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+ XP_021652562.1 44 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRKP 119 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
METGSGCLTE SGAGTPAKSA SGSSSSGSGG PARKVHGGQQ QPPRCQVEGC KVDLSDAKAY 60 YSRHKVCGMH SKSPKVIVAG LEQRFCQQCS RFHLLPEFDQ GKRSCRRRLA GHNERRRKPP 120 PGPVMSSRQS RLSSAIFDNS SRAGSFLVDF SAYSRLTGRD AWPGARPCER APGNQTTAAG 180 RSVPHPPWQN SSQNPPSNIY MQGSASGTGF SSSGIPSGEC YTGVGIADSS CALSLLSNQP 240 WGPRNQASGL GMKDLVNPQG VPMAQSTAPH GAVVNQYPNA SWGFKGSEAS SSSHEMCPDL 300 GLGQISQPLN SQFSGDLELS QQNTRQYMAL DHSREYDSST QHMHWSL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

METGSGCLTE SGAGTPAKSA SGSSSSGSGG PARKVHGGQQ QPPRCQVEGC KVDLSDAKAY  60
YSRHKVCGMH SKSPKVIVAG LEQRFCQQCS RFHLLPEFDQ GKRSCRRRLA GHNERRRKPP  120
PGPVMSSRQS RLSSAIFDNS SRAGSFLVDF SAYSRLTGRD AWPGARPCER APGNQTTAAG  180
RSVPHPPWQN SSQNPPSNIY MQGSASGTGF SSSGIPSGEC YTGVGIADSS CALSLLSNQP  240
WGPRNQASGL GMKDLVNPQG VPMAQSTAPH GAVVNQYPNA SWGFKGSEAS SSSHEMCPDL  300
GLGQISQPLN SQFSGDLELS QQNTRQYMAL DHSREYDSST QHMHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	1e-63	SBP family protein