PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652561.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 374aa MW: 39828 Da PI: 9.0127

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138.9	1.4e-43	71	146	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+ XP_021652561.1 71 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRKP 146 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
METGSGCLTE SGNSNASSPP AESINGLKFG QKIYFENAGA GTPAKSASGS SSSGSGGPAR 60 KVHGGQQQPP RCQVEGCKVD LSDAKAYYSR HKVCGMHSKS PKVIVAGLEQ RFCQQCSRFH 120 LLPEFDQGKR SCRRRLAGHN ERRRKPPPGP VMSSRQSRLS SAIFDNSSRA GSFLVDFSAY 180 SRLTGRDAWP GARPCERAPG NQTTAAGRSV PHPPWQNSSQ NPPSNIYMQG SASGTGFSSS 240 GIPSGECYTG VGIADSSCAL SLLSNQPWGP RNQASGLGMK DLVNPQGVPM AQSTAPHGAV 300 VNQYPNASWG FKGSEASSSS HEMCPDLGLG QISQPLNSQF SGDLELSQQN TRQYMALDHS 360 REYDSSTQHM HWSL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

METGSGCLTE SGNSNASSPP AESINGLKFG QKIYFENAGA GTPAKSASGS SSSGSGGPAR  60
KVHGGQQQPP RCQVEGCKVD LSDAKAYYSR HKVCGMHSKS PKVIVAGLEQ RFCQQCSRFH  120
LLPEFDQGKR SCRRRLAGHN ERRRKPPPGP VMSSRQSRLS SAIFDNSSRA GSFLVDFSAY  180
SRLTGRDAWP GARPCERAPG NQTTAAGRSV PHPPWQNSSQ NPPSNIYMQG SASGTGFSSS  240
GIPSGECYTG VGIADSSCAL SLLSNQPWGP RNQASGLGMK DLVNPQGVPM AQSTAPHGAV  300
VNQYPNASWG FKGSEASSSS HEMCPDLGLG QISQPLNSQF SGDLELSQQN TRQYMALDHS  360
REYDSSTQHM HWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	6e-65	SBP family protein