PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652538.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 422aa MW: 45900.5 Da PI: 6.6627

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.4	4.3e-37	35	152	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ +++ + ++++ + sa++++s+ XP_021652538.1 35 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWHPTTAtTTATTQTSAQQDQSNderdyhl 129 79**************************************************************6555533343333333333333332345666 PP TCP 89 ......................k 89 XP_021652538.1 130 pmenfavlggsgsdctrtvaaaT 152 66666666666655555544430 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MGESHRQAAT SSRLGTRNTG GEIVEVQGGH IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLIKKAKA AIDELAELPA WHPTTATTTA TTQTSAQQDQ 120 SNDERDYHLP MENFAVLGGS GSDCTRTVAA ATTTTATMGT DIQNMEEQQR LAENPNLSSS 180 FLPPSLDSDA IADTIKSFFP MAASVETSSA PIQFQSYPPD LLSRTSSQSQ DLRLSLQSFQ 240 EPILLQQPHH GHAQNEQQVL LSGTAHHLGF DVSSAGWSEH HQHRPAEIGR LQRMVAWNAG 300 GAADTGSGGF IFNPTLSQTV LSPPLLQPFF GQNQFCSQRG PLQSSNTPSV RAWIDPGITS 360 DHHHHNQIPQ IHQQQSLMSG GGFAASVDGF SGFRVPARIQ GEEEEHDGIH NKPSSASSDS 420 RH

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MGESHRQAAT SSRLGTRNTG GEIVEVQGGH IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH  60
TAIQFYDVQD RLGYDRPSKA VDWLIKKAKA AIDELAELPA WHPTTATTTA TTQTSAQQDQ  120
SNDERDYHLP MENFAVLGGS GSDCTRTVAA ATTTTATMGT DIQNMEEQQR LAENPNLSSS  180
FLPPSLDSDA IADTIKSFFP MAASVETSSA PIQFQSYPPD LLSRTSSQSQ DLRLSLQSFQ  240
EPILLQQPHH GHAQNEQQVL LSGTAHHLGF DVSSAGWSEH HQHRPAEIGR LQRMVAWNAG  300
GAADTGSGGF IFNPTLSQTV LSPPLLQPFF GQNQFCSQRG PLQSSNTPSV RAWIDPGITS  360
DHHHHNQIPQ IHQQQSLMSG GGFAASVDGF SGFRVPARIQ GEEEEHDGIH NKPSSASSDS  420
RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-49	TCP family protein