PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652287.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 732aa MW: 77900.2 Da PI: 5.8266

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.3e-16	465	511	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_021652287.1 465 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 511 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MPLSELLYRL AKGKLDYSQE KNPTCSTDLS SEPENDFVEL VWENGQIQSN RARKIQCSSS 60 FPSQTSKIRD KDISNGSNAN MGRFGVIDSV IDEVPMSVPS VEMGLNQDND TLPWLNYPFE 120 DSLQHDYCPE FFIELSGVTV NEHSQNCASM EKRSCGNQSV KDPHNASVHN GLSSDQGHMT 180 KFSSAVDVDA NRPRNSSSQS YPSPSQQCQT SLPYFRSRVS ANNGDSVSNL APHATSGDSI 240 RVPPSGGGFP SIKVQKQVPV SSSTSSSLMN FSHFSRPAAF VKANLHNNGT RAGSGISSIE 300 RMVSKDKGSI ASISDPGESI LIDTFSGLRK GISSNYNPVL VSSKVDAKPL DPKPAEESLL 360 AKQPEALDQV YSKNDKNHCQ IAESATRGLV DGEKTAEPVV ASSVCSGNSV EIVSDEPTLN 420 LKRKPRETED SEGPSEDVEE ESVGAKKAAP ARGGAGSKRS RAAEVHNLSE RRRRDRINEK 480 MRALQELIPN CNKVDKASML DEAIEYLKTL QLQVQIMAMG AGLYMPSMML PPGMLHMHPA 540 HMAQFSPMGV GMGMGMGFGM GMPDMVGGSS GCSMIQVPSM HGAHFPGPPM SGSSALHGMG 600 GSNLPIFGLA TQGHPMPYPC APLLPMSGGP LLKTTMGLNA SGVAGPLDNL DSAPVCGSKD 660 SIQNINLQAM QNCGANSLLN QTSCQCQVTN EHFEQPALVQ NSGEASEVTD KGALKSANGN 720 DNAPTGATAG CD

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MPLSELLYRL AKGKLDYSQE KNPTCSTDLS SEPENDFVEL VWENGQIQSN RARKIQCSSS  60
FPSQTSKIRD KDISNGSNAN MGRFGVIDSV IDEVPMSVPS VEMGLNQDND TLPWLNYPFE  120
DSLQHDYCPE FFIELSGVTV NEHSQNCASM EKRSCGNQSV KDPHNASVHN GLSSDQGHMT  180
KFSSAVDVDA NRPRNSSSQS YPSPSQQCQT SLPYFRSRVS ANNGDSVSNL APHATSGDSI  240
RVPPSGGGFP SIKVQKQVPV SSSTSSSLMN FSHFSRPAAF VKANLHNNGT RAGSGISSIE  300
RMVSKDKGSI ASISDPGESI LIDTFSGLRK GISSNYNPVL VSSKVDAKPL DPKPAEESLL  360
AKQPEALDQV YSKNDKNHCQ IAESATRGLV DGEKTAEPVV ASSVCSGNSV EIVSDEPTLN  420
LKRKPRETED SEGPSEDVEE ESVGAKKAAP ARGGAGSKRS RAAEVHNLSE RRRRDRINEK  480
MRALQELIPN CNKVDKASML DEAIEYLKTL QLQVQIMAMG AGLYMPSMML PPGMLHMHPA  540
HMAQFSPMGV GMGMGMGFGM GMPDMVGGSS GCSMIQVPSM HGAHFPGPPM SGSSALHGMG  600
GSNLPIFGLA TQGHPMPYPC APLLPMSGGP LLKTTMGLNA SGVAGPLDNL DSAPVCGSKD  660
SIQNINLQAM QNCGANSLLN QTSCQCQVTN EHFEQPALVQ NSGEASEVTD KGALKSANGN  720
DNAPTGATAG CD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	470	475	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-40	bHLH family protein