PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651523.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CO-like

Protein Properties

Length: 391aa MW: 44052.4 Da PI: 6.4426

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.6	1.9e-06	23	67	2	40
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 + r C+ +++ + l+C+ ++ lC +C e H+ Ht++ XP_021651523.1 23 QRRLCDYCNDTTALLYCRADSAKLCISCDREVHSTnqlfckHTRS 67 5689****99*******************668888888875 PP
2	zf-B_box	25.3	3.1e-08	68	110	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvpl 42 C+ +++ ++++fCe+ + +C++C e H + H+++p+ XP_021651523.1 68 LLCDACDKSPASIFCETEHYVFCQNCDWERH-RlsssvHNRRPI 110 57*****************************.558899998876 PP
3	CCT	62.3	1.5e-21	347	388	1	42
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvk 42 R+ a++RYkeK+ktR+++K+irYesRKa+AesR R+KGrF+k XP_021651523.1 347 RDSAISRYKEKKKTRRYDKHIRYESRKARAESRVRIKGRFAK 388 899**************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MSDSHTPPHG QQTMKPQQQQ HMQRRLCDYC NDTTALLYCR ADSAKLCISC DREVHSTNQL 60 FCKHTRSLLC DACDKSPASI FCETEHYVFC QNCDWERHRL SSSVHNRRPI EGFSGCRSLS 120 ELISILGFED LGDKKPLFLS EENNGSVESK LDDSGFGDGY SDLLIWESPA VVSIDDLIAS 180 SDSGLNFQAL GVPPLPKNRN AVCGKHKEEI LRQLRELARL EPDSICENPE SKAISLFQPS 240 AAGLNVHEQD ICTGFEPDAK PIPFPVYEEN VFHWISDTGE AGNQVCDPSP LLRSKESSVL 300 PDKQPNIGGS VNRANGREEE EPQFPLSTRM ISVFSKVGSH ELNSQERDSA ISRYKEKKKT 360 RRYDKHIRYE SRKARAESRV RIKGRFAKMD G

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MSDSHTPPHG QQTMKPQQQQ HMQRRLCDYC NDTTALLYCR ADSAKLCISC DREVHSTNQL  60
FCKHTRSLLC DACDKSPASI FCETEHYVFC QNCDWERHRL SSSVHNRRPI EGFSGCRSLS  120
ELISILGFED LGDKKPLFLS EENNGSVESK LDDSGFGDGY SDLLIWESPA VVSIDDLIAS  180
SDSGLNFQAL GVPPLPKNRN AVCGKHKEEI LRQLRELARL EPDSICENPE SKAISLFQPS  240
AAGLNVHEQD ICTGFEPDAK PIPFPVYEEN VFHWISDTGE AGNQVCDPSP LLRSKESSVL  300
PDKQPNIGGS VNRANGREEE EPQFPLSTRM ISVFSKVGSH ELNSQERDSA ISRYKEKKKT  360
RRYDKHIRYE SRKARAESRV RIKGRFAKMD G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	1e-102	CO-like family protein