PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021651480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 680aa MW: 74773.6 Da PI: 6.6086 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 76 | 4.2e-24 | 122 | 223 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_021651480.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAE 212 89****************************986445444..8999*********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021651480.1 213 NGDLCVGIRRA 223 8999****997 PP | |||||||
2 | Auxin_resp | 112.7 | 3.5e-37 | 275 | 358 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Pras++eF+v+++ v++a+++++++GmRfkmafetedss++++ +Gt++ v+ +d +rWpnS+Wr+L+ XP_021651480.1 275 AATLAANGQPFEVVYYPRASAPEFCVRASAVKAAMRIQWCLGMRFKMAFETEDSSRISWfMGTISFVQVADRIRWPNSPWRLLQ 358 68899*****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 680 aa Download sequence |
MIRDFGVMKS QRVAEKCLDS QLWHACAGGM VQMPSVNSKV YYFPQGHAEH AQGNVDFGHC 60 KIPAMIPCKV SAIKYLADPE TDEVFAKISL IPLSDRDVVF MEDGSDDGLF DGTASQEKPA 120 SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSAEPPVQ TILAKDVHGE TWKFRHIYRG 180 TPRRHLLTTG WSNFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGGG NECLSGWNSF 240 GGYSGFLRED ESKLMRRNGN GDMKGKVRAD SVIQAATLAA NGQPFEVVYY PRASAPEFCV 300 RASAVKAAMR IQWCLGMRFK MAFETEDSSR ISWFMGTISF VQVADRIRWP NSPWRLLQVA 360 WDEPDLLQNV KRVSPWLVEL VSNMPASHLS PFSPPMKKLR IPQPPDFSLI GQLPVPSFTS 420 NPLSSNSPLC CVSDNIPVGI QGARHAQFEL SSADLHFNKL QSGLFPVGFQ QLDHSAPTSR 480 IPSRNFMGVA ENNEKISCLL TMGNPTMSLK ENSETKAPHI VLFGQLILPD QQSSQSCSGD 540 TNGNSSSDGN PEKTANLSDG SVSVFHQTGL LENSSDEVSP RYKDHQKTDL GLETGHCKVF 600 MESEDVGRTL DLSVLGSYEE LYGKLANMLG IENSDMPSSV LYRDAAGAIK HTGDEPFSEF 660 LKTARRLTIL TDSGSDNIAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30080.1 | 0.0 | ARF family protein |