PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651479.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 680aa MW: 74773.6 Da PI: 6.6086

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76	4.2e-24	122	223	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_021651479.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAE 212 89**************************986445444..8999*****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021651479.1 213 NGDLCVGIRRA 223 8999**997 PP
2	Auxin_resp	112.7	3.5e-37	275	358	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Pras++eF+v+++ v++a+++++++GmRfkmafetedss++++ +Gt++ v+ +d +rWpnS+Wr+L+ XP_021651479.1 275 AATLAANGQPFEVVYYPRASAPEFCVRASAVKAAMRIQWCLGMRFKMAFETEDSSRISWfMGTISFVQVADRIRWPNSPWRLLQ 358 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MIRDFGVMKS QRVAEKCLDS QLWHACAGGM VQMPSVNSKV YYFPQGHAEH AQGNVDFGHC 60 KIPAMIPCKV SAIKYLADPE TDEVFAKISL IPLSDRDVVF MEDGSDDGLF DGTASQEKPA 120 SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSAEPPVQ TILAKDVHGE TWKFRHIYRG 180 TPRRHLLTTG WSNFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGGG NECLSGWNSF 240 GGYSGFLRED ESKLMRRNGN GDMKGKVRAD SVIQAATLAA NGQPFEVVYY PRASAPEFCV 300 RASAVKAAMR IQWCLGMRFK MAFETEDSSR ISWFMGTISF VQVADRIRWP NSPWRLLQVA 360 WDEPDLLQNV KRVSPWLVEL VSNMPASHLS PFSPPMKKLR IPQPPDFSLI GQLPVPSFTS 420 NPLSSNSPLC CVSDNIPVGI QGARHAQFEL SSADLHFNKL QSGLFPVGFQ QLDHSAPTSR 480 IPSRNFMGVA ENNEKISCLL TMGNPTMSLK ENSETKAPHI VLFGQLILPD QQSSQSCSGD 540 TNGNSSSDGN PEKTANLSDG SVSVFHQTGL LENSSDEVSP RYKDHQKTDL GLETGHCKVF 600 MESEDVGRTL DLSVLGSYEE LYGKLANMLG IENSDMPSSV LYRDAAGAIK HTGDEPFSEF 660 LKTARRLTIL TDSGSDNIAR

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MIRDFGVMKS QRVAEKCLDS QLWHACAGGM VQMPSVNSKV YYFPQGHAEH AQGNVDFGHC  60
KIPAMIPCKV SAIKYLADPE TDEVFAKISL IPLSDRDVVF MEDGSDDGLF DGTASQEKPA  120
SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSAEPPVQ TILAKDVHGE TWKFRHIYRG  180
TPRRHLLTTG WSNFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGGG NECLSGWNSF  240
GGYSGFLRED ESKLMRRNGN GDMKGKVRAD SVIQAATLAA NGQPFEVVYY PRASAPEFCV  300
RASAVKAAMR IQWCLGMRFK MAFETEDSSR ISWFMGTISF VQVADRIRWP NSPWRLLQVA  360
WDEPDLLQNV KRVSPWLVEL VSNMPASHLS PFSPPMKKLR IPQPPDFSLI GQLPVPSFTS  420
NPLSSNSPLC CVSDNIPVGI QGARHAQFEL SSADLHFNKL QSGLFPVGFQ QLDHSAPTSR  480
IPSRNFMGVA ENNEKISCLL TMGNPTMSLK ENSETKAPHI VLFGQLILPD QQSSQSCSGD  540
TNGNSSSDGN PEKTANLSDG SVSVFHQTGL LENSSDEVSP RYKDHQKTDL GLETGHCKVF  600
MESEDVGRTL DLSVLGSYEE LYGKLANMLG IENSDMPSSV LYRDAAGAIK HTGDEPFSEF  660
LKTARRLTIL TDSGSDNIAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein