PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651420.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 538aa MW: 59039.1 Da PI: 6.201

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.3	9e-16	332	378	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_021651420.1 332 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 378 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MNHYVPDFKL DEDCAIPTSP TLTRPKKSIT SEDEIMELLW QNGQVVVQSQ TQTPFKKSQH 60 HKYDDDVPPV DQSNPREIRS SHEQQQQLLF MQEDEMAAWL HYPLNDTNFD QDFCADLPYP 120 STACVTSTTT NTSAAPIHSN LDPETRPQPA VSATAAASRP PIPPTRRAEV VQNFGYFSRH 180 RATVGKSESG PSNLKTVLRE LTVVDSNDTP AMGSESRISE AADGRSTTVV SSGDNACGTM 240 SGTAVAGTSS QAGASNNSKD KMTCEMTVTS SPGGSSSSTE PPSQKPAAED RKRKGKEVDT 300 EYHSEDFEFE SADAKRQLRR STSTKRSRAA EVHNLSERRR RDRINEKMRA LQELIPRCNK 360 SDKASMLDEA IEYLKSLQLQ VQMMSMGCSI VPMMFPGIQQ HMPPLGIGMG MGMGMEMGMN 420 RPMMPFPNVL AGASMPTPAA AAHLGPRFPM PAFHMPPVPS PAPDQSRIQA INQSDPMIST 480 QNPNQPRVPN FADPYQQYLG LQQMQIPVSQ NQVMTQPSTS KPGTSQVAEN LDNHQSGT

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MNHYVPDFKL DEDCAIPTSP TLTRPKKSIT SEDEIMELLW QNGQVVVQSQ TQTPFKKSQH  60
HKYDDDVPPV DQSNPREIRS SHEQQQQLLF MQEDEMAAWL HYPLNDTNFD QDFCADLPYP  120
STACVTSTTT NTSAAPIHSN LDPETRPQPA VSATAAASRP PIPPTRRAEV VQNFGYFSRH  180
RATVGKSESG PSNLKTVLRE LTVVDSNDTP AMGSESRISE AADGRSTTVV SSGDNACGTM  240
SGTAVAGTSS QAGASNNSKD KMTCEMTVTS SPGGSSSSTE PPSQKPAAED RKRKGKEVDT  300
EYHSEDFEFE SADAKRQLRR STSTKRSRAA EVHNLSERRR RDRINEKMRA LQELIPRCNK  360
SDKASMLDEA IEYLKSLQLQ VQMMSMGCSI VPMMFPGIQQ HMPPLGIGMG MGMGMEMGMN  420
RPMMPFPNVL AGASMPTPAA AAHLGPRFPM PAFHMPPVPS PAPDQSRIQA INQSDPMIST  480
QNPNQPRVPN FADPYQQYLG LQQMQIPVSQ NQVMTQPSTS KPGTSQVAEN LDNHQSGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	342	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	1e-75	bHLH family protein