PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021651338.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 821aa    MW: 89067.3 Da    PI: 6.1827
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021651338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.6e-21116171156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  XP_021651338.1 116 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 171
                     688999***********************************************999 PP
2START207.84.3e-653265491205
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W++s     e++n +e++++f++  +     + +ea+r++g+v+  +  lve+l+d++ +W e+++    + +t+
  XP_021651338.1 326 ELALAAMDELVKMAQTDEPLWFRSLeggrEILNHEEYMRIFTPCIGmkpsgFVSEASRETGMVIISSLALVETLMDSN-RWAEMFPcmiaRTSTT 419
                     5899**************************************999899******************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vis g      g lqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+ds ++ +  + +v +++lpSg+++++++ng++kvtwveh+
  XP_021651338.1 420 DVISIGmggtrnGSLQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDSVRETSGAPTFVNCRRLPSGCVVQDMPNGYCKVTWVEHA 514
                     ************************************************************999******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqce 205
                     ++++ ++h+l+++l++sg+ +ga++wvatlqrq e
  XP_021651338.1 515 EYDETQIHQLYQPLISSGMGFGAQRWVATLQRQSE 549
                     ********************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
MSFGGFLEKG SPGGGGARIV ADIAYSSSNM PTGAIAQPRL IPPSLTKSMF NSPGLSLALQ  60
QPNIDGQGDV ARMAENFESS GGRRSREEEH ESRSGSDNMD GASGDDQDAA DNRPRKKRYH  120
RHTPQQIQEL EALFKECPHP DEKQRLELSK RLCLETRQVK FWFQNRRTQM KTQLERHENS  180
LLRQENDKLR AENMSIRDAM RNPICSNCGG PAIIGDISLE EQHLTIENAR LKDELDRVCA  240
LAGKFLGRPI SLLTTSIGPP MPNSSLELGV GGNGFGCLST VATTAPLGPD FGAGISNALP  300
VVTQTRPLTA GVTGLDRSLE RSMFLELALA AMDELVKMAQ TDEPLWFRSL EGGREILNHE  360
EYMRIFTPCI GMKPSGFVSE ASRETGMVII SSLALVETLM DSNRWAEMFP CMIARTSTTD  420
VISIGMGGTR NGSLQLMHAE LQVLSPLVPV REVNFLRFCK QHAEGVWAVV DVSIDSVRET  480
SGAPTFVNCR RLPSGCVVQD MPNGYCKVTW VEHAEYDETQ IHQLYQPLIS SGMGFGAQRW  540
VATLQRQSEC LAILMSSTVS TRDHTAITSG GRRSMLKLAQ RMTDNFCAGV CASTVHKWNK  600
LNAGNVDEDV RVMTRKSVDD PGEPPGIVLS AATSVWLPVS PQRLFDFLRD ERLRSEWDIL  660
SNGGPMQEMA HIAKGQDHGN CVSLLRASAM NANQSSMLIL QETCIDAAGS LVVYAPVDIP  720
AMHVVMNGGD SAYVALLPSG FAVVPDGPGS RGSPTTPNGP TGNNGGAGGQ HRVSGSLLTV  780
AFQILVNSLP TAKLTVESVE TVNNLISCTV QKIKAALQCE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein