PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651237.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 1017aa MW: 114234 Da PI: 5.1842

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43	1e-13	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_021651237.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.7	1.7e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_021651237.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1017 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKKPP PGFFDVADED RPVEQPKFPT 240 TIEELEGKRR IDVEAQLRKQ DIARNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPAP 300 QISDHELEEI AKMGYASDLA GSEELTEGSG ATRALLANYA QTPQQGMTPL RTPQRTPAGK 360 GDAIMMEAEN LARLRESQTP LLGGDNPELH PSDFSGVTPK KREIQTPNPM LTPSATPGGV 420 GLTPRIGMTP SRDGYSFGMT PKGTPIRDEL HINEDMDMHD SAKLEQRRQA DIRRNLRSGL 480 SNLPQPKNEY QIVFQPPPED HEEAEEKIEE DMSDRIAREK AEEEARLQAL LRKRSKVLQR 540 ELPRPPAASL ELIRNSLLRA DEDKSSFVPP TSIELADEMI RKELLTLLEH DNAKYPLDEK 600 QNKEKKKGAK RAANASAVSV PVIEDFEEDE LKEADNLIRE EAQYICVAMG HESESLDAFV 660 DAHKTCLNDL MYFPTRNAYG LSSVAGNVEK LAALQNEFEN VKMRLEAERE KALRLEKKVN 720 VLTQGYQTRS ERQLLPPIES ILKQMDTAGT ELECFQALQK QEQLAASHRI NGLWEEVQKQ 780 KELEQTLQMR YGNLVAELER IQHIIADYRT LAKQQEEIAA KNRALELAEN AAKQSAMHNS 840 ETSEPMPSDD VGSSVPVDSS NLEISGKQTN AARDHVHASP KHSTNDDSDN KHAPMDTDAS 900 LSTDVHSVVE GVHTTHVPKA DENNKDGVPA HNLINQGDNI PDVVVVDGNK LNDESVIGNA 960 SDVAISAEFI KDGAVAEDQE IVMEATKPDG VVTKQGDGDE DERTKSMTDE VNVVNSD

Sequence ? help Back to Top

Protein Sequence Length: 1017 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKKPP PGFFDVADED RPVEQPKFPT  240
TIEELEGKRR IDVEAQLRKQ DIARNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPAP  300
QISDHELEEI AKMGYASDLA GSEELTEGSG ATRALLANYA QTPQQGMTPL RTPQRTPAGK  360
GDAIMMEAEN LARLRESQTP LLGGDNPELH PSDFSGVTPK KREIQTPNPM LTPSATPGGV  420
GLTPRIGMTP SRDGYSFGMT PKGTPIRDEL HINEDMDMHD SAKLEQRRQA DIRRNLRSGL  480
SNLPQPKNEY QIVFQPPPED HEEAEEKIEE DMSDRIAREK AEEEARLQAL LRKRSKVLQR  540
ELPRPPAASL ELIRNSLLRA DEDKSSFVPP TSIELADEMI RKELLTLLEH DNAKYPLDEK  600
QNKEKKKGAK RAANASAVSV PVIEDFEEDE LKEADNLIRE EAQYICVAMG HESESLDAFV  660
DAHKTCLNDL MYFPTRNAYG LSSVAGNVEK LAALQNEFEN VKMRLEAERE KALRLEKKVN  720
VLTQGYQTRS ERQLLPPIES ILKQMDTAGT ELECFQALQK QEQLAASHRI NGLWEEVQKQ  780
KELEQTLQMR YGNLVAELER IQHIIADYRT LAKQQEEIAA KNRALELAEN AAKQSAMHNS  840
ETSEPMPSDD VGSSVPVDSS NLEISGKQTN AARDHVHASP KHSTNDDSDN KHAPMDTDAS  900
LSTDVHSVVE GVHTTHVPKA DENNKDGVPA HNLINQGDNI PDVVVVDGNK LNDESVIGNA  960
SDVAISAEFI KDGAVAEDQE IVMEATKPDG VVTKQGDGDE DERTKSMTDE VNVVNSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDTRQRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein