PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021651111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YC | ||||||||
Protein Properties | Length: 272aa MW: 30462.4 Da PI: 5.5535 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 178.2 | 7.7e-56 | 88 | 192 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdfl XP_021651111.1 88 QLQMFWANQmqeIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 182 89******988889********************************************************************************* PP NF-YC 93 vdivprdelk 102 vdi+prdelk XP_021651111.1 183 VDIIPRDELK 192 *******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MDQSEQTQQQ QHSQQPQQPV MGVVAGAGQM SYTTTPYQTA AMIASGTPAI AVPSPTQPPS 60 TFSNSPHQLT YQQAQHFHHQ QQQQQQQQLQ MFWANQMQEI EQTSDFKNHS LPLARIKKIM 120 KADEDVRMIS AEAPVIFAKA CEMFILELTL RSWIHTEENK RRTLQKNDIA AAISRTDVFD 180 FLVDIIPRDE LKEEGLGVTK ATIPMVGSPA DIPYYYVPPQ PPVGPPGMIM GKPVDQAAAY 240 GAQQPRPPVA FMPWPQTQPQ QQEAQQQQSD TS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 167 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 5e-72 | NF-YC family protein |