PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651064.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 444aa MW: 49154.2 Da PI: 6.4289

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.7	6.3e-06	333	371	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_021651064.1 333 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 371 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MADEFNTTTN WWDSSRNRFD SGSSSSSSGL NSLGSFAWPS EMVDVKGRSS IESASVSDSS 60 VVFHDTQKLQ QGQDSGADLH MMGLGLSSQA MDWNQALLRS DKTDSSLRSM LQENLNSSTS 120 YQQETGIGSS QVQWRERMFS GESSMNEFKQ MNRGFSLDQP QFSPHGSSCD STVTCQGLQF 180 QMDSTAIYGS PSTMLQGLLG SDNQPTQQSS FENRSMSYTY GANYGITSNE LVPSWANKVP 240 QFLRNSPPKQ PPHQLHFSNN APFWNASASS MTDVRPNFFP SLQPQFPTSN FEEKPKNISE 300 VRDSSTVVKK SGSEGATKRP RNETPSPMPA FKVRKEKMGD RITALQQLVS PFGKTDTASV 360 LSEAIEYIKF LHEQVTVLSN PYMKSTGAPM HHQQNSDKSS KDPEGQKQDL RSRGLCLVPV 420 SSTFPVTHET TVDFWTPTFG GTFR

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MADEFNTTTN WWDSSRNRFD SGSSSSSSGL NSLGSFAWPS EMVDVKGRSS IESASVSDSS  60
VVFHDTQKLQ QGQDSGADLH MMGLGLSSQA MDWNQALLRS DKTDSSLRSM LQENLNSSTS  120
YQQETGIGSS QVQWRERMFS GESSMNEFKQ MNRGFSLDQP QFSPHGSSCD STVTCQGLQF  180
QMDSTAIYGS PSTMLQGLLG SDNQPTQQSS FENRSMSYTY GANYGITSNE LVPSWANKVP  240
QFLRNSPPKQ PPHQLHFSNN APFWNASASS MTDVRPNFFP SLQPQFPTSN FEEKPKNISE  300
VRDSSTVVKK SGSEGATKRP RNETPSPMPA FKVRKEKMGD RITALQQLVS PFGKTDTASV  360
LSEAIEYIKF LHEQVTVLSN PYMKSTGAPM HHQQNSDKSS KDPEGQKQDL RSRGLCLVPV  420
SSTFPVTHET TVDFWTPTFG GTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	3e-99	bHLH family protein