PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021650879.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | YABBY | ||||||||
Protein Properties | Length: 132aa MW: 14751.8 Da PI: 7.9641 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 106 | 7.4e-33 | 8 | 122 | 6 | 134 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ + + + +++ +++ +++ s+++ XP_021650879.1 8 VPEQLCYIPCNFCNIVLAVSVPCSSLFDTVTVRCGHCTNLWSVNMAAAFQSLSWQDV---Q-----GPNYTLPDYRIDMGSSSKGNNKISMRA-- 92 689********************************************9999999885...2.....222233333333333333333332222.. PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfik 134 +v++ v+rPPekrqr+Psayn+fik XP_021650879.1 93 ----PASNVSEDRVVNRPPEKRQRIPSAYNQFIK 122 ....222333334589*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MSSCIGVVPE QLCYIPCNFC NIVLAVSVPC SSLFDTVTVR CGHCTNLWSV NMAAAFQSLS 60 WQDVQGPNYT LPDYRIDMGS SSKGNNKISM RAPASNVSED RVVNRPPEKR QRIPSAYNQF 120 IKYCNPQSLE FF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 1e-56 | YABBY family protein |