PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021650878.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | YABBY | ||||||||
Protein Properties | Length: 185aa MW: 20776.6 Da PI: 8.2128 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 198.3 | 3.2e-61 | 7 | 158 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ + + ++ + + s+s+ +++ XP_021650878.1 7 VEPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDA-------------QAPNYSIPAYRIDLGSSSKCNNKI 88 679********************************************99999998885.............222333333333333333333322 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ +v++ v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWah+P+ihfgl XP_021650878.1 89 SMR-APASNVSEDRVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIHFGL 158 222.2233444445689****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MSSCIDVEPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS 60 WQDAQAPNYS IPAYRIDLGS SSKCNNKISM RAPASNVSED RVVNRPPEKR QRVPSAYNQF 120 IKEEIQRIKA NNPDISHREA FSTAAKNWAH YPHIHFGLML ETNSQAKLND ASEKHLMSRA 180 APYNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 4e-93 | YABBY family protein |