PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021650802.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 552aa MW: 62519.1 Da PI: 6.8491 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.8 | 6.6e-07 | 85 | 107 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C f++ G+C+ GdrC+F+H+p XP_021650802.1 85 VPCYFYYS-GFCNKGDRCSFMHDP 107 58998888.*************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 552 aa Download sequence |
MEEELQKRNT DCVYFLASPL TCNKGMDCEY RHNEIARLNP RDCWYWLAGN CLNPTCGFRH 60 PPLEKHAEAP SESASSSPPA KKTNVPCYFY YSGFCNKGDR CSFMHDPDAS TPTGKSVNTL 120 LAKEGTPLDN KTSVGNDIVS APTEAHANPS ETAPKAVMGL KLQPKEDVQL PAPKNAVVES 180 FFPEIAVTHC EEAVSFKSDF LIQANSFIRS RSHISTDQSS EEQVDDHVEP EERWESSPGF 240 DVLVDDKSEN MGYKDDQEYL LALDREHREL NNHFLGYQFD DLEYDLTYCD ADAMYNREIY 300 DSFDCTDNVH LIDDVGNCSG CSSGQMLDSP FLRKRKLLPM ELPINGQRVV DLRDCLRKRR 360 VIDGHPVIRP SRRHDSSRLH DRSRERPRRP SLSQRLHGRL ASEVGKNTIG SLGDNGIMLN 420 GANPRGWHRH SRLSKSRLRN KENKLAKRQF LSSEMPSKPV PRERKYTQAS AEFTGPKSLA 480 QIKEEKKKAE ENGEYTGKTG YSSRMVSADF EGPKPLSEIL KDKRKMGIVE GSDGITDDYE 540 VMPCRLKRTK NI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 332 | 337 | LRKRKL |