PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650533.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 709aa MW: 78184.3 Da PI: 7.1064

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.5	2.6e-23	112	213	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + + XP_021650533.1 112 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVVAKDVHGEMWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAE 202 89**************************996555555..8********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021650533.1 203 NGDLCVGIRRA 213 8999**997 PP
2	Auxin_resp	118.1	7.4e-39	276	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+ a+++++FevvY+Prast+eF+vk+++v++a++++++ GmRfkmafetedss++++ +Gtv++v+ +dp+rWpnS+Wr+L+ XP_021650533.1 276 AVAHAANGQPFEVVYYPRASTPEFCVKASSVRAAMRIQWCSGMRFKMAFETEDSSRISWfMGTVASVQVFDPIRWPNSPWRLLQ 359 567899****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MKELEKSLDP QLWHACAGSM VQIPPVNSRV FYFPQGHAEH SQSMVDFSSS PRIPALVLCR 60 LAAVQYLADF ETDEVYAKIS IVPLPNNEFD FGEEMGICDN NNGNNTEKPA SFAKTLTQSD 120 ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVVAKDVHGE MWKFRHIYRG TPRRHLLTTG 180 WSTFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGIG NGIESSSPSS GWTANASCVN 240 PYGGFSLFLK EDENKGMRNG GLRGRGRVRP EEVLEAVAHA ANGQPFEVVY YPRASTPEFC 300 VKASSVRAAM RIQWCSGMRF KMAFETEDSS RISWFMGTVA SVQVFDPIRW PNSPWRLLQV 360 TWDEPDLLQN VKCVSPWLVE LVSNMPVIHL SPFSPPRKKL RLPQHLDFPL DSQFQWPSFS 420 GNPLGPSSPL CCLSDNTPAG IQGARHAQFG ISLSDLQLNN KLQSGLFLSG LQRFNSHSRI 480 SESFMKGHTN SDENLSCLLT MGSSNTNSEK SDNVKRHQFL LFGQPILTEQ QISHSCSTDA 540 VSQVLSGKFS SDESPEKSKS HGVLGCASEK QISVEKSAST GLSWQSLHTT ETGLDAGQCK 600 VFLESEDVGR TLDLSVLGSY EELHGRLANM FGIERSDMFG HVLYRDATGS VKQMGDEPFS 660 VFVKTAKRLT IPMKPTNSDN IGRPWITGMR SAENGLEASN KTGPLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MKELEKSLDP QLWHACAGSM VQIPPVNSRV FYFPQGHAEH SQSMVDFSSS PRIPALVLCR  60
LAAVQYLADF ETDEVYAKIS IVPLPNNEFD FGEEMGICDN NNGNNTEKPA SFAKTLTQSD  120
ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVVAKDVHGE MWKFRHIYRG TPRRHLLTTG  180
WSTFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGIG NGIESSSPSS GWTANASCVN  240
PYGGFSLFLK EDENKGMRNG GLRGRGRVRP EEVLEAVAHA ANGQPFEVVY YPRASTPEFC  300
VKASSVRAAM RIQWCSGMRF KMAFETEDSS RISWFMGTVA SVQVFDPIRW PNSPWRLLQV  360
TWDEPDLLQN VKCVSPWLVE LVSNMPVIHL SPFSPPRKKL RLPQHLDFPL DSQFQWPSFS  420
GNPLGPSSPL CCLSDNTPAG IQGARHAQFG ISLSDLQLNN KLQSGLFLSG LQRFNSHSRI  480
SESFMKGHTN SDENLSCLLT MGSSNTNSEK SDNVKRHQFL LFGQPILTEQ QISHSCSTDA  540
VSQVLSGKFS SDESPEKSKS HGVLGCASEK QISVEKSAST GLSWQSLHTT ETGLDAGQCK  600
VFLESEDVGR TLDLSVLGSY EELHGRLANM FGIERSDMFG HVLYRDATGS VKQMGDEPFS  660
VFVKTAKRLT IPMKPTNSDN IGRPWITGMR SAENGLEASN KTGPLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein